hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12403272/chunk_1/iprscan-20080502-12403272.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1783
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00063.11.fs Myosin head (motor domain)                   94.2    6.6e-28   1
PF07653.7.fs Variant SH3 domain                           38.8    1.5e-10   1
PF00784.8.fs MyTH4 domain                                 34.4    2.6e-09   1
PF07653.7.ls Variant SH3 domain                           40.6    4.9e-09   1
PF00784.8.ls MyTH4 domain                                 33.2    4.7e-07   1
PF00018.18.ls SH3 domain                                   11.3     0.0012   1
PF00612.17.ls IQ calmodulin-binding motif                  14.6       0.33   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00063.11.fs   1/1     146   353 ..   520   791 .]    94.2  6.6e-28
PF00612.17.ls   1/1     386   406 ..     1    21 []    14.6     0.33
PF00784.8.ls   1/1     561   673 ..     1   122 []    33.2  4.7e-07
PF00784.8.fs   1/1     561   645 ..     1    96 [.    34.4  2.6e-09
PF00018.18.ls   1/1    1455  1511 ..     1    59 []    11.3   0.0012
PF07653.7.fs   1/1    1456  1511 ..     1    69 []    38.8  1.5e-10
PF07653.7.ls   1/1    1456  1511 ..     1    69 []    40.6  4.9e-09

Alignments of top-scoring domains:
PF00063.11.fs: domain 1 of 1, from 146 to 353: score 94.2, E = 6.6e-28
                   *->katDqtFldKLlqtfsskhprlthFAqkpgrfkkgksrqgkteFiik
                      +atD tFl+K + ++ + hp    +  kp r+++++       F+++
    KIAA1783   146    QATDHTFLQKSHYHH-GDHP---SY-AKP-RLPLPV-------FTVR 179  

                   HYAGdVeYnaegfleKNkDpLfddlisllksSsdepllaeLFpeeelseA
                   HYAG+V+Y++  fl  N+D L + +++ l +S+   l+ +LF+e+e    
    KIAA1783   180 HYAGTVTYQVHKFLNRNRDQLDPAVVEMLGQSQL-QLVGSLFQEAEP--- 225  

                   aNltlkapdfeadfdeeeaaaksaklgsgkgksgkkknfleTvgsqfkes
                                                 ++ g++    +T++s f + 
    KIAA1783   226 -----------------------------QSRGGRG--R-PTLASRFQQA 243  

                   lgeLmktLsstAnlnPHfvRCIKPNekKkagqFDaslVlhQlrclGvLEi
                   l  L++ L      +++f+ C+ PN  K +g FD   V +Ql    +LE 
    KIAA1783   244 LEDLIARLGRS---HVYFIQCLTPNPGKLPGLFDVGHVTEQLHQAAILE- 289  

                   giRirraGFPnRitfdeFlqRYrlLapktwpsgfrpewvgdakkgceliL
                    +  r a FP R++f  Fl  ++ L+++   ++       +++++c ++L
    KIAA1783   290 AVGTRSANFPVRVPFEAFLASFQALGSEGQEDL-------SDREKCGAVL 332  

                   qslrqtpgnlDkeeyrfGkTKiFfR<-*
                    +      + ++ +y +G TK+ +    
    KIAA1783   333 SQV--L--GAESPLYHLGATKVLLQ    353  

PF00612.17.ls: domain 1 of 1, from 386 to 406: score 14.6, E = 0.33
                   *->rraaikIQaawRGylaRkryk<-*
                      +r   ++Qa+ RG++aRkry    
    KIAA1783   386    QRVLPRMQARMRGFQARKRYL    406  

PF00784.8.ls: domain 1 of 1, from 561 to 673: score 33.2, E = 4.7e-07
                   *->rsridlvqkIlkqgikrpeLRDEiYCQiiKQltkNPsqkkqSalrGW
                       +r   + +++ qg   p LR+E++ Q++ Ql  NP+   q + rGW
    KIAA1783   561    WQRQIMGAYLVRQGQCWPGLRNELFSQLVAQLWQNPD--EQQSQRGW 605  

                   eLlylctgtFpPSeellkyLsEqFlhrraheqssgpelegyaadcqe...
                    L+  +++ FpP   l k+L   F ++ a+         g aa cq +  
    KIAA1783   606 ALMAVLLSAFPPLPVLQKPLL-KFVSDQAP--------RGMAALCQHkll 646  

                   .rLkiYktqknGYqsRkypPsrlEieAik<-*
                   ++L+  ++q ++  +R  pP  lE +A     
    KIAA1783   647 gALE--QSQLASGATRAHPPTQLEWLAGW    673  

PF00784.8.fs: domain 1 of 1, from 561 to 645: score 34.4, E = 2.6e-09
                   *->rsridlvqkIlkqgikrpeLRDEiYCQiiKQltkNPsqkkqSalrGW
                       +r   + +++ qg   p LR+E++ Q++ Ql  NP+   q + rGW
    KIAA1783   561    WQRQIMGAYLVRQGQCWPGLRNELFSQLVAQLWQNPD--EQQSQRGW 605  

                   eLlylctgtFpPSeellkyLsEqFlhrraheqssgpelegyaadcqerL<
                    L+  +++ FpP   l k+L   F ++ a+         g aa cq +L 
    KIAA1783   606 ALMAVLLSAFPPLPVLQKPLL-KFVSDQAP--------RGMAALCQHKL  645  

                   -*
                     
    KIAA1783     -    -    

PF00018.18.ls: domain 1 of 1, from 1455 to 1511: score 11.3, E = 0.0012
                   *->kkvvALYDYearesdELsFkkGDvitvleksdd.pgWWkgrlkgtgG
                       +v+AL  Y   + + LsF +GD i++l     +pgW +g      G
    KIAA1783  1455    GYVIALRSYITDNCSLLSFHRGDLIKLLPVATLePGWQFGSAG---G 1498 

                   keGliPsNYVepv<-*
                   + Gl+P+  V+p    
    KIAA1783  1499 RSGLFPADIVQPA    1511 

PF07653.7.fs: domain 1 of 1, from 1456 to 1511: score 38.8, E = 1.5e-10
                   *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidvggskddd.gww
                      y++a+++y+   +++       Ls+++Gd++k++   +    ++gw 
    KIAA1783  1456    YVIALRSYIT-DNCSL------LSFHRGDLIKLL---PVATLEpGWQ 1492 

                   egeslggGrrrRGlvPssaveel<-*
                   +g+   gGr   Gl+P+++v++    
    KIAA1783  1493 FGSA--GGRS--GLFPADIVQPA    1511 

PF07653.7.ls: domain 1 of 1, from 1456 to 1511: score 40.6, E = 4.9e-09
                   *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidvggskddd.gww
                      y++a+++y+   +++       Ls+++Gd++k++   +    ++gw 
    KIAA1783  1456    YVIALRSYIT-DNCSL------LSFHRGDLIKLL---PVATLEpGWQ 1492 

                   egeslggGrrrRGlvPssaveel<-*
                   +g+   gGr   Gl+P+++v++    
    KIAA1783  1493 FGSA--GGRS--GLFPADIVQPA    1511 

//