hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13123768/chunk_1/iprscan-20080502-13123768.nocrc
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Query sequence: KIAA1802
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                  70.8    1.8e-16   5

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/5      23    46 ..     1    23 []    19.0     0.67
SM00355      2/5      71    94 ..     1    23 []     9.3       28
SM00355      3/5     718   741 ..     1    23 []     8.9       31
SM00355      4/5     747   769 ..     1    23 []    24.0    0.021
SM00355      5/5     774   795 ..     1    23 []     9.6       26

Alignments of top-scoring domains:
SM00355: domain 1 of 5, from 23 to 46: score 19.0, E = 0.67
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ++C++ C+++ +++++ + Hm ++H   
    KIAA1802    23    LECDH-CSFRGTDYeNVQIHMGtIH    46   

SM00355: domain 2 of 5, from 71 to 94: score 9.3, E = 28
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ++C++ C ++ + +++   H+ ++H   
    KIAA1802    71    FHCHK-CFFTSKMYsNVYYHITsKH    94   

SM00355: domain 3 of 5, from 718 to 741: score 8.9, E = 31
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y C+i C  +   k+a  +H+ ++H   
    KIAA1802   718    YYCKI-CCCRAMKKgAVLHHLVnKH    741  

SM00355: domain 4 of 5, from 747 to 769: score 24.0, E = 0.021
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC+i Cgk f  ++ Lk+H+  H   
    KIAA1802   747    YKCTI-CGKAFLLEsLLKNHVAAH    769  

SM00355: domain 5 of 5, from 774 to 795: score 9.6, E = 26
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kCp  C++  + ++ +k+H+  H   
    KIAA1802   774    LKCPR-CNFESNFPrGFKKHLT-H    795  

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