HUGE |
Gene/Protein Characteristic Table for KIAA1836 |
Link to :
Rouge |
GTOP | SWISS-PROT/TrEMBL | GeneCards| RefDIC | |
Features : DNA sequence | Protein sequence | Expression | Mapping | |
Product ID : | |
---|---|
Accession No. : | AB058739 |
Description : | Coiled-coil and C2 domain-containing protein 1B. |
HUGO Gene Name : | coiled-coil and C2 domain containing 1B (CC2D1B) |
Clone Name : | fh12206 [Vector Info] |
Source : | Human fetal brain |
Features of the cloned DNA sequence |
Description | |
---|---|---|
Length: 5482 bp
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The cloned DNA sequence was revised by direct RT-PCR/sequencing experiments following the alert of coding interruption by GeneMark analysis.
cloned DNA seq. | ||
Warning for N-terminal truncation: | YES | YES |
Warning for coding interruption: | YES | YES |
Length of 3'UTR 2924 bp Genome contig ID gi89161185r_52488855 PolyA signal sequence
(AATAAA,-27) +----*----+----*----+----*----+----
GCAAACTGAATAAACTACAGAAATTTTTTAGAATCFlanking genome sequence
(100000 - 99951) ----+----*----+----*----+----*----+----*----+----*
AAGAAGTCTTGCTTACAATTAAAGGGCAAACTCCTGTGACTCTAACATTT
Chr f/r start end exon identity class ContigView(URL based/DAS) 1 r 52588855 52599292 20 99.4 Perfect prediction
Features of the protein sequence |
Description | |
---|---|---|
Length: 718 aa
This protein sequence is predicted from the revised DNA sequence
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
No significant homologues
Search method | interpro_ID | From | To | Entry | Definition |
---|---|---|---|---|---|
HMMPfam | IPR000008 | 561 | 659 | PF00168 | C2 calcium-dependent membrane targeting |
HMMSmart | IPR006608 | 28 | 85 | SM00685 | Protein of unknown function DM14 |
IPR006608 | 141 | 198 | SM00685 | Protein of unknown function DM14 | |
IPR006608 | 245 | 303 | SM00685 | Protein of unknown function DM14 | |
IPR006608 | 397 | 455 | SM00685 | Protein of unknown function DM14 | |
IPR000008 | 560 | 674 | SM00239 | C2 calcium-dependent membrane targeting |
Method | No. | N terminal | transmembrane region | C terminal | type | length |
---|---|---|---|---|---|---|
- | - | - | - | - | - | - |
Expression profile |
Description | |
---|---|---|
RT-PCR-ELISA | Description |
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Experimental conditions
: GGTAGCAGTAACATGACAAAC | |
: TCATAGTCTCCATCCATTCAG | |
: 95 °C |
RH mapping information |
Description | |
---|---|---|
: 1 |
: unigene | |
: - | |
: - | |
: - | |
: - |
How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage ![]() | |