hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-14103266/chunk_1/iprscan-20080502-14103266.nocrc
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Query sequence: KIAA1836
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00168.20.fs C2 domain                                       23.7    1.7e-06   1
PF00168.20.ls C2 domain                                       25.7    0.00015   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00168.20.fs   1/1     561   659 ..     1    88 []    23.7  1.7e-06
PF00168.20.ls   1/1     561   659 ..     1    88 []    25.7  0.00015

Alignments of top-scoring domains:
PF00168.20.fs: domain 1 of 1, from 561 to 659: score 23.7, E = 1.7e-06
                   *->LrVtvieAknLppkDkkng..ksDPYVkvylggdkkd..qkkkTkvi
                      +++ ++++ nLp+      ++  D++V+++++   +d+ qk kT v+
    KIAA1836   561    MHLIIVRGMNLPAPP-GVTpdDLDAFVRFEFHYPNSDqaQKSKTAVV 606  

                   kktlNPvWNEtFtFevpppd......lqe.tLeieVyDydrfgr.ddflG
                   k+t +P++++ F ++++ ++++ ++  q++ +++e++++++f r+d+++G
    KIAA1836   607 KNTNSPEFDQLFKLNINRNHrgfkrvIQSkGIKFEIFHKGSFFRsDKLVG 656  

                   evs<-*
                   +++   
    KIAA1836   657 TAH    659  

PF00168.20.ls: domain 1 of 1, from 561 to 659: score 25.7, E = 0.00015
                   *->LrVtvieAknLppkDkkng..ksDPYVkvylggdkkd..qkkkTkvi
                      +++ ++++ nLp+      ++  D++V+++++   +d+ qk kT v+
    KIAA1836   561    MHLIIVRGMNLPAPP-GVTpdDLDAFVRFEFHYPNSDqaQKSKTAVV 606  

                   kktlNPvWNEtFtFevpppd......lqe.tLeieVyDydrfgr.ddflG
                   k+t +P++++ F ++++ ++++ ++  q++ +++e++++++f r+d+++G
    KIAA1836   607 KNTNSPEFDQLFKLNINRNHrgfkrvIQSkGIKFEIFHKGSFFRsDKLVG 656  

                   evs<-*
                   +++   
    KIAA1836   657 TAH    659  

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