hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-15061739/chunk_1/iprscan-20080502-15061739.nocrc
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Query sequence: KIAA1869
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00630                                                 581.3   3.5e-170   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00630    1/1      66   494 ..     1   532 []   581.3 3.5e-170

Alignments of top-scoring domains:
SM00630: domain 1 of 1, from 66 to 494: score 581.3, E = 3.5e-170
                   *->fnhllldedsgierlyVGArNriysLslpnlsllsevvtgpvldwps
                      ++++ +   ++  +l+V+Ar++++s++l+  ++ + +v  + l+w+s
    KIAA1869    66    LDFQRFLTLNR--TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRS 110  

                   ceepnekclkceeCaakgkeeCssneteCdNyirvLlvdndhiadthLyv
                            ++e+Ca++gk      ++eC NyirvL++++     + L++
    KIAA1869   111 Q--------DVENCAVRGK----L-TDECYNYIRVLVPWDS----QTLLA 143  

                   CGTnafgPdVtCrlinlgdlepadeseaedqiltlclyskevnlsesgrg
                   CGTn+f+P  +Cr + +++l+                   + +++ sg++
    KIAA1869   144 CGTNSFSP--VCRSYGITSLQ-------------------QEGEELSGQA 172  

                   kCPydPlgsstsvvvdggvPgggeLYsgtsadfsgvalsysssdpiifRs
                   +CP+d+ +s+++++++g       LYs+t+adf +       sd++ +Rs
    KIAA1869   173 RCPFDATQSNVAIFAEG------SLYSATAADFQA-------SDAVVYRS 209  

                   lgttqdgfefefhslrttiydskwgydlnepnFVyaFeipesgdgdfVYF
                   lg+        +++lr  +ydskw   l ep+FV+a e+     gd+VYF
    KIAA1869   210 LGP--------QPPLRSAKYDSKW---LREPHFVQALEH-----GDHVYF 243  

                   FFrEtaveainrdcssekavvsRVARvCknDvGG.qrlLqkkWtSFLKar
                   FFrE +ve+++   +  ++ +sRVARvCk+D+GG++r L  +WtSFLK+r
    KIAA1869   244 FFREVSVEDAR--LG--RVQFSRVARVCKRDMGGsPRALDRHWTSFLKLR 289  

                   LnCsvpgkggvrefyFneLQavfllppGaLArelgiesddvlYgVFsqgq
                   LnCsvp  g+++ fyF++LQa +  +       ++      l+gVF+   
    KIAA1869   290 LNCSVP--GDST-FYFDVLQALTGPVN----LHGR----SALFGVFT--- 325  

                   qtssrdaanpipgSAVCaFslkdInavFneGpfkcyegpnsawlpvegnk
                    t++    n+ipgSAVCaF l++I++ F+ G+fk++++ + aw+pv++++
    KIAA1869   326 -TQT----NSIPGSAVCAFYLDEIERGFE-GKFKEQRSLDGAWTPVSEDR 369  

                   vPyprPGtCisntfregrndssskdlPddvlnfikdhpLmdeavpPltgr
                   vP+prPG+C++ + ++   +sss+dlPddvl+fik hpL d avpP+t++
    KIAA1869   370 VPSPRPGSCAGVGGAA--LFSSSRDLPDDVLTFIKAHPLLDPAVPPVTHQ 417  

                   PllvktgtdyrlTsiaVdrvrgldGgkneytVlFlGTsdGrvlKvvvsrs
                   Pll+ t ++ +lT++aVd ++g++ +    tV+FlG++dG+vlKv+ +++
    KIAA1869   418 PLLTLT-SRALLTQVAVDGMAGPHSN---ITVMFLGSNDGTVLKVLTPGG 463  

                   ssssssaglesvlleelqvfppgsepirdmvlsskk<-*
                   +s+    g+e++llee+  ++p+ +++   +  +++   
    KIAA1869   464 RSG----GPEPILLEEIDAYSPA-RCSGKRTAQTAR    494  

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