hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16024159/chunk_1/iprscan-20080502-16024159.nocrc
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Query sequence: KIAA1901
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       304.3    2.1e-88   1
PF00069.15.fs Protein kinase domain                       302.4    7.7e-88   1
PF07714.7.fs Protein tyrosine kinase                      89.2    8.6e-26   1
PF07714.7.ls Protein tyrosine kinase                      67.7    3.4e-17   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1      11   265 ..     1   287 []   302.4  7.7e-88
PF07714.7.fs   1/1      11   206 ..     1   212 [.    89.2  8.6e-26
PF00069.15.ls   1/1      11   265 ..     1   287 []   304.3  2.1e-88
PF07714.7.ls   1/1      11   265 ..     1   272 []    67.7  3.4e-17

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 11 to 265: score 302.4, E = 7.7e-88
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      y++l+k+G+GsfG+  + k   +g+++++K+i+ ++ +sk++++ rr
    KIAA1901    11    YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRR 57   

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                     E+++l++++HpNIv+++++fe++++ly+V++ycegG    dLf ++  
    KIAA1901    58 --EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG----DLFKRIN- 100  

                   trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
                     +kg+l f+ed++ +++ Qi+ +l++ H+++i+HRD+K++NI+l ++g+
    KIAA1901   101 -AQKGVL-FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT 148  

                   vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD
                   v     ++DFG+A++l ++  + + t  GTp+Y++PE++  +++y  k+D
    KIAA1901   149 V----QLGDFGIARVL-NsTVElARTCIGTPYYLSPEICE-NKPYNNKSD 192  

                   vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi
                   +W+lG++lyel+t k  F        +++ l+ ki +++++  s + +  
    KIAA1901   193 IWALGCVLYELCTLKHAFEAG-----SMKNLVLKIISGSFPPVSLHYS-- 235  

                   srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-*
                                ++++L++ +++++P +R++   il+  ++   
    KIAA1901   236 ------------YDLRSLVSQLFKRNPRDRPSVNSILEKGFI    265  

PF07714.7.fs: domain 1 of 1, from 11 to 206: score 89.2, E = 8.6e-26
                   *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei
                       + ++k+GeG+FG   k++l  +  +++ +  +K ++     s++e 
    KIAA1901    11    YVRLQKIGEGSFG---KAILV-KSTEDGRQYVIKEInIS-RMSSKE- 51   

                   eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd
                    re+  rE++++ ++ +HpNiV++     +  ++    lyiV+ y+egGd
    KIAA1901    52 -REESRREVAVLANM-KHPNIVQYRESFEE-NGS----LYIVMDYCEGGD 94   

                   LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV
                   L +   ++  g  +   ++l++ +Qi+ ++ + +++++ HRD+   N+ +
    KIAA1901    95 LFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL 143  

                   senlvVKIsDFGLaRdiynddyY.vrkkgggklPvkWmAPEslkygkFts
                   +++++V  +DFG aR +    + +v     +      ++PE   ++ ++ 
    KIAA1901   144 TKDGTVQLGDFGIARVL----NStVELARTCIGTPYYLSPEICENKPYNN 189  

                   kSDVWSFGVlLWEiftl<-*
                   kSD+W+ G++L+E++tl   
    KIAA1901   190 KSDIWALGCVLYELCTL    206  

PF00069.15.ls: domain 1 of 1, from 11 to 265: score 304.3, E = 2.1e-88
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      y++l+k+G+GsfG+  + k   +g+++++K+i+ ++ +sk++++ rr
    KIAA1901    11    YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRR 57   

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                     E+++l++++HpNIv+++++fe++++ly+V++ycegG    dLf ++  
    KIAA1901    58 --EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG----DLFKRIN- 100  

                   trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
                     +kg+l f+ed++ +++ Qi+ +l++ H+++i+HRD+K++NI+l ++g+
    KIAA1901   101 -AQKGVL-FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT 148  

                   vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD
                   v     ++DFG+A++l ++  + + t  GTp+Y++PE++  +++y  k+D
    KIAA1901   149 V----QLGDFGIARVL-NsTVElARTCIGTPYYLSPEICE-NKPYNNKSD 192  

                   vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi
                   +W+lG++lyel+t k  F        +++ l+ ki +++++  s + +  
    KIAA1901   193 IWALGCVLYELCTLKHAFEAG-----SMKNLVLKIISGSFPPVSLHYS-- 235  

                   srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-*
                                ++++L++ +++++P +R++   il+  ++   
    KIAA1901   236 ------------YDLRSLVSQLFKRNPRDRPSVNSILEKGFI    265  

PF07714.7.ls: domain 1 of 1, from 11 to 265: score 67.7, E = 3.4e-17
                   *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei
                       + ++k+GeG+FG   k++l  +  +++ +  +K ++     s++e 
    KIAA1901    11    YVRLQKIGEGSFG---KAILV-KSTEDGRQYVIKEInIS-RMSSKE- 51   

                   eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd
                    re+  rE++++ ++ +HpNiV++     +  ++    lyiV+ y+egGd
    KIAA1901    52 -REESRREVAVLANM-KHPNIVQYRESFEE-NGS----LYIVMDYCEGGD 94   

                   LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV
                   L +   ++  g  +   ++l++ +Qi+ ++ + +++++ HRD+   N+ +
    KIAA1901    95 LFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL 143  

                   senlvVKIsDFGLaRdiynddyY.vrkkgggklPvkWmAPEslkygkFts
                   +++++V  +DFG aR +    + +v     +      ++PE   ++ ++ 
    KIAA1901   144 TKDGTVQLGDFGIARVL----NStVELARTCIGTPYYLSPEICENKPYNN 189  

                   kSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLprPenCPd
                   kSD+W+ G++L+E++tl     ++  s   ++ ++  +G   p   + + 
    KIAA1901   190 KSDIWALGCVLYELCTLK-HA-FEAGSMKNLVLKI-ISGSFPPVSLHYSY 236  

                   elYdlMlqCWaedPedRPtFsel..veeL<-*
                   +l +l  q  +++P dRP+   + +  ++   
    KIAA1901   237 DLRSLVSQLFKRNPRDRPSVNSIleKGFI    265  

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