# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fk02059.fasta.nr -Q ../query/KIAA1934.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1934, 452 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826613 sequences Expectation_n fit: rho(ln(x))= 5.1454+/-0.000186; mu= 12.1523+/- 0.010 mean_var=80.2016+/-15.351, 0's: 29 Z-trim: 33 B-trim: 0 in 0/66 Lambda= 0.143213 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|160419235|sp|Q96PV4.2|PNMA5_HUMAN RecName: Full ( 448) 2996 628.5 1e-177 gi|71680414|gb|AAI01113.1| Paraneoplastic antigen ( 448) 2986 626.4 4.3e-177 gi|221045596|dbj|BAH14475.1| unnamed protein produ ( 448) 2981 625.4 8.8e-177 gi|109132677|ref|XP_001082427.1| PREDICTED: simila ( 448) 2808 589.6 5.1e-166 gi|149027100|gb|EDL82842.1| rCG19945 [Rattus norve ( 436) 1511 321.6 2.3e-85 gi|160419236|sp|Q5DTT8.2|PNMA5_MOUSE RecName: Full ( 618) 1476 314.5 4.5e-83 gi|149760148|ref|XP_001496576.1| PREDICTED: simila ( 463) 1179 253.1 1.1e-64 gi|114691178|ref|XP_001145495.1| PREDICTED: parane ( 455) 1135 244.0 5.8e-62 gi|12053257|emb|CAB66812.1| hypothetical protein [ ( 455) 1135 244.0 5.8e-62 gi|74725635|sp|Q9UL41.1|PNMA3_HUMAN RecName: Full= ( 463) 1135 244.0 5.9e-62 gi|189065387|dbj|BAG35226.1| unnamed protein produ ( 463) 1135 244.0 5.9e-62 gi|114691176|ref|XP_001145572.1| PREDICTED: parane ( 463) 1135 244.0 5.9e-62 gi|119593296|gb|EAW72890.1| paraneoplastic antigen ( 455) 1132 243.4 8.9e-62 gi|119593294|gb|EAW72888.1| paraneoplastic antigen ( 463) 1132 243.4 9e-62 gi|90079087|dbj|BAE89223.1| unnamed protein produc ( 463) 1123 241.5 3.3e-61 gi|149027101|gb|EDL82843.1| rCG19951 [Rattus norve ( 465) 1108 238.4 2.8e-60 gi|81914522|sp|Q8JZW8.1|PNMA3_MOUSE RecName: Full= ( 466) 1097 236.1 1.4e-59 gi|73964283|ref|XP_547896.2| PREDICTED: similar to ( 584) 1094 235.6 2.5e-59 gi|122136095|sp|Q2KIT6.1|PNMA2_BOVIN RecName: Full ( 364) 1091 234.8 2.7e-59 gi|37999352|sp|Q8VHZ4.1|PNMA1_RAT RecName: Full=Pa ( 353) 1090 234.6 3e-59 gi|160419157|sp|A6QLK5.1|PNMA1_BOVIN RecName: Full ( 353) 1085 233.5 6.2e-59 gi|57105266|ref|XP_543234.1| PREDICTED: similar to ( 364) 1078 232.1 1.7e-58 gi|149737354|ref|XP_001490004.1| PREDICTED: simila ( 353) 1077 231.9 2e-58 gi|12856730|dbj|BAB30762.1| unnamed protein produc ( 353) 1076 231.7 2.3e-58 gi|37999715|sp|Q8ND90.2|PNMA1_HUMAN RecName: Full= ( 353) 1072 230.9 4e-58 gi|37999678|sp|Q8C1C8.1|PNMA1_MOUSE RecName: Full= ( 353) 1072 230.9 4e-58 gi|109084267|ref|XP_001091302.1| PREDICTED: parane ( 353) 1070 230.4 5.3e-58 gi|194038524|ref|XP_001928996.1| PREDICTED: simila ( 353) 1068 230.0 7.1e-58 gi|14030861|gb|AAD13810.3| paraneoplastic neuronal ( 353) 1066 229.6 9.4e-58 gi|149746219|ref|XP_001494457.1| PREDICTED: simila ( 364) 1064 229.2 1.3e-57 gi|48146341|emb|CAG33393.1| PNMA1 [Homo sapiens] ( 353) 1062 228.8 1.7e-57 gi|37999784|sp|Q9GMU3.1|PNMA2_MACFA RecName: Full= ( 364) 1057 227.8 3.5e-57 gi|194041523|ref|XP_001925541.1| PREDICTED: simila ( 384) 1054 227.2 5.6e-57 gi|75040916|sp|Q5R486.1|PNMA2_PONAB RecName: Full= ( 364) 1051 226.5 8.3e-57 gi|37999812|sp|Q9UL42.2|PNMA2_HUMAN RecName: Full= ( 364) 1047 225.7 1.5e-56 gi|114619368|ref|XP_528094.2| PREDICTED: similar t ( 364) 1042 224.7 3e-56 gi|54673708|gb|AAH36489.1| Paraneoplastic antigen ( 364) 1039 224.1 4.6e-56 gi|37999755|sp|Q96BY2.1|MOAP1_HUMAN RecName: Full= ( 351) 1033 222.8 1.1e-55 gi|11139669|gb|AAG31786.1|AF305550_1 MAP-1 [Homo s ( 351) 1032 222.6 1.2e-55 gi|114654506|ref|XP_510137.2| PREDICTED: modulator ( 351) 1031 222.4 1.4e-55 gi|60552762|gb|AAH91310.1| Modulator of apoptosis ( 352) 1009 217.8 3.3e-54 gi|37999754|sp|Q95KI4.1|MOAP1_MACFA RecName: Full= ( 351) 1007 217.4 4.4e-54 gi|37999782|sp|Q9ERH6.1|MOAP1_MOUSE RecName: Full= ( 352) 992 214.3 3.8e-53 gi|33286890|gb|AAH55374.1| Modulator of apoptosis ( 352) 988 213.5 6.7e-53 gi|109506096|ref|XP_001067312.1| PREDICTED: simila ( 345) 978 211.4 2.8e-52 gi|109505170|ref|XP_001073080.1| PREDICTED: simila ( 345) 977 211.2 3.2e-52 gi|74009136|ref|XP_549350.2| PREDICTED: similar to ( 481) 966 209.1 2e-51 gi|149030339|gb|EDL85395.1| rCG52129 [Rattus norve ( 364) 956 206.9 6.7e-51 gi|37999667|sp|Q8BHK0.1|PNMA2_MOUSE RecName: Full= ( 365) 956 206.9 6.7e-51 gi|148704039|gb|EDL35986.1| paraneoplastic antigen ( 388) 952 206.1 1.2e-50 >>gi|160419235|sp|Q96PV4.2|PNMA5_HUMAN RecName: Full=Par (448 aa) initn: 2996 init1: 2996 opt: 2996 Z-score: 3346.8 bits: 628.5 E(): 1e-177 Smith-Waterman score: 2996; 100.000% identity (100.000% similar) in 448 aa overlap (5-452:1-448) 10 20 30 40 50 60 KIAA19 KVGAMALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF 10 20 30 40 50 70 80 90 100 110 120 KIAA19 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS 60 70 80 90 100 110 130 140 150 160 170 180 KIAA19 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFE 120 130 140 150 160 170 190 200 210 220 230 240 KIAA19 DWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 DWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFG 180 190 200 210 220 230 250 260 270 280 290 300 KIAA19 DKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 DKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARV 240 250 260 270 280 290 310 320 330 340 350 360 KIAA19 AMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 AMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQA 300 310 320 330 340 350 370 380 390 400 410 420 KIAA19 RAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATYPKAEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 RAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATYPKAEN 360 370 380 390 400 410 430 440 450 KIAA19 QTPGREGPQAAGEELGNEAGAGAMSHPKPWET :::::::::::::::::::::::::::::::: gi|160 QTPGREGPQAAGEELGNEAGAGAMSHPKPWET 420 430 440 >>gi|71680414|gb|AAI01113.1| Paraneoplastic antigen like (448 aa) initn: 2986 init1: 2986 opt: 2986 Z-score: 3335.6 bits: 626.4 E(): 4.3e-177 Smith-Waterman score: 2986; 99.777% identity (99.777% similar) in 448 aa overlap (5-452:1-448) 10 20 30 40 50 60 KIAA19 KVGAMALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF 10 20 30 40 50 70 80 90 100 110 120 KIAA19 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS 60 70 80 90 100 110 130 140 150 160 170 180 KIAA19 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFE 120 130 140 150 160 170 190 200 210 220 230 240 KIAA19 DWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 DWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFG 180 190 200 210 220 230 250 260 270 280 290 300 KIAA19 DKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARV ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 DKEDFGASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARV 240 250 260 270 280 290 310 320 330 340 350 360 KIAA19 AMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 AMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQA 300 310 320 330 340 350 370 380 390 400 410 420 KIAA19 RAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATYPKAEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|716 RAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATYPKAEN 360 370 380 390 400 410 430 440 450 KIAA19 QTPGREGPQAAGEELGNEAGAGAMSHPKPWET :::::::::::::::::::::::::::::::: gi|716 QTPGREGPQAAGEELGNEAGAGAMSHPKPWET 420 430 440 >>gi|221045596|dbj|BAH14475.1| unnamed protein product [ (448 aa) initn: 2981 init1: 2981 opt: 2981 Z-score: 3330.0 bits: 625.4 E(): 8.8e-177 Smith-Waterman score: 2981; 99.554% identity (99.554% similar) in 448 aa overlap (5-452:1-448) 10 20 30 40 50 60 KIAA19 KVGAMALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF 10 20 30 40 50 70 80 90 100 110 120 KIAA19 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS 60 70 80 90 100 110 130 140 150 160 170 180 KIAA19 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFE 120 130 140 150 160 170 190 200 210 220 230 240 KIAA19 DWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 DWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFG 180 190 200 210 220 230 250 260 270 280 290 300 KIAA19 DKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 DKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARV 240 250 260 270 280 290 310 320 330 340 350 360 KIAA19 AMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQA :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|221 AMTPALRGKLELLDQRGCPPNFLELMKLTRDEEEWENTEAVMKNKEKPSGRGRGASGRQA 300 310 320 330 340 350 370 380 390 400 410 420 KIAA19 RAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATYPKAEN :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 RAGASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATYPKAEN 360 370 380 390 400 410 430 440 450 KIAA19 QTPGREGPQAAGEELGNEAGAGAMSHPKPWET :::::::::::::::::::::::::::::::: gi|221 QTPGREGPQAAGEELGNEAGAGAMSHPKPWET 420 430 440 >>gi|109132677|ref|XP_001082427.1| PREDICTED: similar to (448 aa) initn: 2808 init1: 2808 opt: 2808 Z-score: 3136.8 bits: 589.6 E(): 5.1e-166 Smith-Waterman score: 2808; 94.196% identity (97.321% similar) in 448 aa overlap (5-452:1-448) 10 20 30 40 50 60 KIAA19 KVGAMALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF :::::::::::::::::::::::.:::.:::::::::::.:::::: ::::::::: gi|109 MALTLLEDWCKGMDMDPRKALLIIGIPVECSEVEIQDTVQAGLQPLRAYRVLGRMF 10 20 30 40 50 70 80 90 100 110 120 KIAA19 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS :::::::::::::::::.::::::::::::::::::::::::::::: :::::::::::: gi|109 RREDNAKAVFIELADTVDYTTLPSHIPGKGGSWEVVVKPRNPDDEFLIRLNYFLKDEGRS 60 70 80 90 100 110 130 140 150 160 170 180 KIAA19 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFE ::::::::::::::::::::::.:::: ::::: ::::::::::::::::: :::::::: gi|109 MTDVARALGCCSLPAESLDAEVVPQVRPPPLEPLKESMWYRKLKVFSGTASASPGEETFE 120 130 140 150 160 170 190 200 210 220 230 240 KIAA19 DWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFG :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|109 DWLEQVTEIMPIWQVSEMEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFG 180 190 200 210 220 230 250 260 270 280 290 300 KIAA19 DKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARV ::::::::::.:::: ::::::::::::::::::::::.::::::::.:::::::::::: gi|109 DKEDFRASQFKFLQTFPKIGEKVSTFLLRLEPLLQKAVQKSPLSVRSADMIRLKHLLARV 240 250 260 270 280 290 310 320 330 340 350 360 KIAA19 AMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQA .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQA 300 310 320 330 340 350 370 380 390 400 410 420 KIAA19 RAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATYPKAEN :::::.:::::::::::.:::: ::.::::::::::::: ::::: ::.::: :::::: gi|109 RAEASASAPQATVQARSLSDSSTQTVQGGLPPLVKRRRLSCSESTREEDYGQAMYPKAEN 360 370 380 390 400 410 430 440 450 KIAA19 QTPGREGPQAAGEELGNEAGAGAMSHPKPWET :::::::::::::: ::::::::::::::::: gi|109 QTPGREGPQAAGEESGNEAGAGAMSHPKPWET 420 430 440 >>gi|149027100|gb|EDL82842.1| rCG19945 [Rattus norvegicu (436 aa) initn: 1649 init1: 849 opt: 1511 Z-score: 1688.7 bits: 321.6 E(): 2.3e-85 Smith-Waterman score: 1660; 58.036% identity (81.473% similar) in 448 aa overlap (5-451:1-435) 10 20 30 40 50 60 KIAA19 KVGAMALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF ::..::.:::::::.:::::.::::::..:.:.::.:..: :: ::::..:.:::: gi|149 MAVALLDDWCKGMDLDPRKAVLIVGIPVQCTEAEIKDALKEGLPPLCAHKVIGRMF 10 20 30 40 50 70 80 90 100 110 120 KIAA19 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS ::::.::::.:::...:.:: .:.:::..::.::::::::.:::::...: :::.:::: gi|149 RREDEAKAVLIELTEVVDYTMMPTHIPAEGGAWEVVVKPRSPDDEFINKLIYFLRDEGRR 60 70 80 90 100 110 130 140 150 160 170 KIAA19 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPP-KESMWYRKLKVFSGTASPSPGEETF :.:::.::: ..:. .. . . : . :. ... :.:::::::. :.::::.: gi|149 MVDVAKALGFSTVPTGRMELKNLDQDKPKGLKSLCSNGTCYQKLKVFSGSPFPGPGEESF 120 130 140 150 160 170 180 190 200 210 220 230 KIAA19 EDWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIF : :::.:::.: .::::: ::..::.::::: :::::..: :.:::.:::::: :::.:: gi|149 ETWLEEVTELMHLWQVSESEKKQRLVESLRGSALSIMQALWASNDSLTVEQCLKALKHIF 180 190 200 210 220 230 240 250 260 270 280 290 KIAA19 GDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLAR :.::: .. ::::::.: : .::.: .::::::::::::..::::..:.: :::::.:.: gi|149 GNKEDCKVFQFRFLQSSQKPAEKISDYLLRLEPLLQKAVQQSPLSTHSADSIRLKHILSR 240 250 260 270 280 290 300 310 320 330 340 350 KIAA19 VAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQ :.:: .::::: ::::.::::.::::::: :::::::.: : .::. ... .. gi|149 VSMTTGLRGKLSLLDQQGCPPTFLELMKLTRDEEEWETT---MVGKEQNQAE------KE 300 310 320 330 340 360 370 380 390 400 410 KIAA19 ARAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATYPKAE :.. . : :...: . : . : ::: : ::::::: .:: :.: . . :: gi|149 NRTRET--ADQVVTQEEYFREISTQTI-GEEITSVKRRRLLWRQSTGEEEHMRESGFWAE 350 360 370 380 390 400 420 430 440 450 KIAA19 NQTPGREGPQAAGEELGNEAGAGAMSHPKPWET :.. .: : .. .: ::: :: :::::.: : gi|149 NESD-EEKPFVTIQESGNERGAWAMSHPNPKEI 410 420 430 >>gi|160419236|sp|Q5DTT8.2|PNMA5_MOUSE RecName: Full=Par (618 aa) initn: 1585 init1: 835 opt: 1476 Z-score: 1647.6 bits: 314.5 E(): 4.5e-83 Smith-Waterman score: 1586; 56.250% identity (80.580% similar) in 448 aa overlap (5-451:1-435) 10 20 30 40 50 60 KIAA19 KVGAMALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF ::..::.:::::::.::.::.::::::.. .:. :.:..: :: :::::.:.:::: gi|160 MAVALLDDWCKGMDLDPKKAVLIVGIPVQYTEAAINDALKEGLPPLCAYKVIGRMF 10 20 30 40 50 70 80 90 100 110 120 KIAA19 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS ::::.::::.::: ..:.:: .:.:::..::.::::::::.:::::...: :::.:::: gi|160 RREDEAKAVLIELPEVVDYTMMPTHIPAEGGAWEVVVKPRSPDDEFMNKLIYFLRDEGRR 60 70 80 90 100 110 130 140 150 160 170 KIAA19 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPP-KESMWYRKLKVFSGTASPSPGEETF ..:::.::: ..:. ... . . : . :. ..: :.:::::::. :.::::.: gi|160 IVDVAKALGFSTVPTGKIELKNLDQDKPKGLKSLCNNSTCYKKLKVFSGSPFPGPGEESF 120 130 140 150 160 170 180 190 200 210 220 230 KIAA19 EDWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIF : :::.:::.: .::::: ::.. ::::::: :::::..: ..:::.:::::: :::.:: gi|160 ETWLEEVTELMQLWQVSEREKKQCLLESLRGSALSIMQALWTSNDSLTVEQCLKALKHIF 180 190 200 210 220 230 240 250 260 270 280 290 KIAA19 GDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLAR :.::: .. ::::::.: : .:::: .::::::::::::..::::..:.: :::::.:.. gi|160 GNKEDSKVLQFRFLQSSQKPAEKVSDYLLRLEPLLQKAVQQSPLSAHSADSIRLKHVLSQ 240 250 260 270 280 290 300 310 320 330 340 350 KIAA19 VAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQ :.:: .::::: ::::.::::.::::::: :::::::.: .:....:. : .:. . gi|160 VSMTTGLRGKLSLLDQQGCPPTFLELMKLTRDEEEWEST-VVVEEQEQVR---RDSSACE 300 310 320 330 340 350 360 370 380 390 400 410 KIAA19 ARAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATYPKAE : : ....::.. . : :: : ::::::: .:. : . . . :: gi|160 A-------ANEVVTQAEDSREVSTQTT-GEEMTSVKRRRLLWRHSAGEEGQRKESGFWAE 360 370 380 390 400 420 430 440 450 KIAA19 NQTPGREGPQAAGEELGNEAGAGAMSHPKPWET .. : .. : . ..: ::: :: :.:::.: : gi|160 SE-PDEQKPYVRAQESGNERGAWAVSHPNPKEIEAQDSQEFLPVAGNRDTLTKSWGSPDK 410 420 430 440 450 460 gi|160 GTGDMSVAEGQQGQGKAPNFLLARNDPNKQEQIPHSSVTTKWQDRGECQRLKWGASMITR 470 480 490 500 510 520 >>gi|149760148|ref|XP_001496576.1| PREDICTED: similar to (463 aa) initn: 1220 init1: 661 opt: 1179 Z-score: 1317.7 bits: 253.1 E(): 1.1e-64 Smith-Waterman score: 1205; 45.022% identity (69.913% similar) in 462 aa overlap (5-449:1-460) 10 20 30 40 50 60 KIAA19 KVGAMALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF : ::::.:::.: .. ....::.::: .:.: :...:.. .:. : :::.:::: gi|149 MPLTLLQDWCRGEHLNTQRSMLILGIPEDCGEDEFEETLQEALRHLGRYRVIGRMF 10 20 30 40 50 70 80 90 100 110 120 KIAA19 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS :::.::.: ..:::. ..:. .: .:::::: ::::::::: : :::.::. ::..: :. gi|149 RREENAHAFLLELAQDIDYALIPREIPGKGGPWEVVVKPRNSDGEFLNRLKCFLEEERRT 60 70 80 90 100 110 130 140 150 160 170 KIAA19 MTDVARAL---GCCSLP--AESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPG ..:. :.: . : : : : : . :. . ..: :.: ::.:.::::.. :: gi|149 VSDMNRVLRSDANCPAPRVAISPDLWTWAQALGAAVQPLLEQMLYRELRVFSGNTVSIPG 120 130 140 150 160 170 180 190 200 210 220 230 KIAA19 EETFEDWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDAL ::: :::..::.. .::: : ::::::.: ::::::...: :.::: .::::.:: :: gi|149 ALTFEAWLEHTTEVLEMWQVPEGEKRRRLMECLRGPALQVVRGLRANNAAITVEECLAAL 180 190 200 210 220 230 240 250 260 270 280 290 KIAA19 KQIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKH ::.:: :. . ....: .. . :::::.:.::::::::.::.:. .: :.... :::. gi|149 KQVFGPVESRKIAHMKFCKAHQEAGEKVSSFVLRLEPLLQRAVEKNAVSRRNVNQARLKQ 240 250 260 270 280 290 300 310 320 330 340 350 KIAA19 LLARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRG-RG .:. ...: :: .:.:. :: ::.:: :.::.:.::::: : . ... . : : gi|149 VLSGATLTDKLRDRLKLMKQRRKPPGFLALVKLLREEEEWEATLGPERERLEGLEAGIRP 300 310 320 330 340 350 360 370 380 390 400 KIAA19 ASGRQARAEASVSAPQATVQARSFSDSSPQTIQGGLP--PLVKRRRLLGSESTR------ .: .: . .: :: :.::: :..: . :: : : :: . . gi|149 SSRTSAFGAVSFPAPGNTLQARP-SQGSQRGRCGGQQWREAVPRASSRGSGKQKHHTFCY 360 370 380 390 400 410 410 420 430 440 450 KIAA19 --GED-HGQATYPKAENQTPGREGPQAAGEELGNEAGAGAMSHPKPWET ::: : .. . : .. ::: : :: . : ::::: gi|149 SCGEDGHIRVQCSNPPNLLLVKQKRQAAIES-GNGSWAWDKSHPKPKAK 420 430 440 450 460 >>gi|114691178|ref|XP_001145495.1| PREDICTED: paraneopla (455 aa) initn: 1126 init1: 611 opt: 1135 Z-score: 1268.6 bits: 244.0 E(): 5.8e-62 Smith-Waterman score: 1142; 45.343% identity (72.794% similar) in 408 aa overlap (5-407:1-395) 10 20 30 40 50 60 KIAA19 KVGAMALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF : ::::.:::.: .. :. .::.::: .:.: :...:.. . . : :::.:::: gi|114 MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMF 10 20 30 40 50 70 80 90 100 110 120 KIAA19 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS :::.::.:...:::. ..:. :: .:::::: :::.::::: : :::.::: ::..: :. gi|114 RREENAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRT 60 70 80 90 100 110 130 140 150 160 170 KIAA19 MTDVARALGC---CSLPAESLDAE--VMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPG ..:. :.:: :: : ... : . :. . ..: :.: ::.:.::::.. :: gi|114 VSDMNRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPG 120 130 140 150 160 170 180 190 200 210 220 230 KIAA19 EETFEDWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDAL .:. :::..::.. .::: : ::::::.: ::::::... :.:.: :::::.:: :: gi|114 ALAFDAWLEHTTEMLQMWQVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAAL 180 190 200 210 220 230 240 250 260 270 280 290 KIAA19 KQIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKH .:.:: :. . .: .. .. . :::::.:.::::::::.::... .: :.... :::. gi|114 QQVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKR 240 250 260 270 280 290 300 310 320 330 340 350 KIAA19 LLARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGA .:. ... :: ::.:. :: ::.:: :.::.:.::::: : . .. : .: . gi|114 VLSGATLPDKLRDKLKLMKQRRKPPGFLALVKLLREEEEWEATL----GPDRESLEGLEV 300 310 320 330 340 350 360 370 380 390 400 410 KIAA19 SGRQARAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATY . : ..:.: ... :: :. :. :: .::: : . :: gi|114 APRPPARITGVGAVPLPASGNSF-DARPS--QG-----YRRRRGRG-QHRRGGVARAGSR 360 370 380 390 400 420 430 440 450 KIAA19 PKAENQTPGREGPQAAGEELGNEAGAGAMSHPKPWET gi|114 GSRKRKRHTFCYSCGEDGHIRVQCINSSNLLLAKETKEILEGGEREAQTXSR 410 420 430 440 450 >>gi|12053257|emb|CAB66812.1| hypothetical protein [Homo (455 aa) initn: 1126 init1: 611 opt: 1135 Z-score: 1268.6 bits: 244.0 E(): 5.8e-62 Smith-Waterman score: 1142; 45.343% identity (72.794% similar) in 408 aa overlap (5-407:1-395) 10 20 30 40 50 60 KIAA19 KVGAMALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF : ::::.:::.: .. :. .::.::: .:.: :...:.. . . : :::.:::: gi|120 MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMF 10 20 30 40 50 70 80 90 100 110 120 KIAA19 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS :::.::.:...:::. ..:. :: .:::::: :::.::::: : :::.::: ::..: :. gi|120 RREENAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRT 60 70 80 90 100 110 130 140 150 160 170 KIAA19 MTDVARALGC---CSLPAESLDAE--VMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPG ..:. :.:: :: : ... : . :. . ..: :.: ::.:.::::.. :: gi|120 VSDMNRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPG 120 130 140 150 160 170 180 190 200 210 220 230 KIAA19 EETFEDWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDAL .:. :::..::.. .::: : ::::::.: ::::::... :.:.: :::::.:: :: gi|120 ALAFDAWLEHTTEMLQMWQVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAAL 180 190 200 210 220 230 240 250 260 270 280 290 KIAA19 KQIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKH .:.:: :. . .: .. .. . :::::.:.::::::::.::... .: :.... :::. gi|120 QQVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKR 240 250 260 270 280 290 300 310 320 330 340 350 KIAA19 LLARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGA .:. ... :: ::.:. :: ::.:: :.::.:.::::: : . .. : .: . gi|120 VLSGATLPDKLRDKLKLMKQRRKPPGFLALVKLLREEEEWEATL----GPDRESLEGLEV 300 310 320 330 340 350 360 370 380 390 400 410 KIAA19 SGRQARAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATY . : ..:.: ... :: :. :. :: .::: : . :: gi|120 APRPPARITGVGAVPLPASGNSF-DARPS--QG-----YRRRRGRG-QHRRGGVARAGSR 360 370 380 390 400 420 430 440 450 KIAA19 PKAENQTPGREGPQAAGEELGNEAGAGAMSHPKPWET gi|120 GSRKRKRHTFCYSCGEDGHIRVQCINPSNLLLAKETKEILEGGEREAQTNSR 410 420 430 440 450 >>gi|74725635|sp|Q9UL41.1|PNMA3_HUMAN RecName: Full=Para (463 aa) initn: 1157 init1: 611 opt: 1135 Z-score: 1268.5 bits: 244.0 E(): 5.9e-62 Smith-Waterman score: 1152; 43.103% identity (68.319% similar) in 464 aa overlap (5-448:1-459) 10 20 30 40 50 60 KIAA19 KVGAMALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF : ::::.:::.: .. :. .::.::: .:.: :...:.. . . : :::.:::: gi|747 MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMF 10 20 30 40 50 70 80 90 100 110 120 KIAA19 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS :::.::.:...:::. ..:. :: .:::::: :::.::::: : :::.::: ::..: :. gi|747 RREENAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRT 60 70 80 90 100 110 130 140 150 160 170 KIAA19 MTDVARALGC---CSLPAESLDAE--VMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPG ..:. :.:: :: : ... : . :. . ..: :.: ::.:.::::.. :: gi|747 VSDMNRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPG 120 130 140 150 160 170 180 190 200 210 220 230 KIAA19 EETFEDWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDAL .:. :::..::.. .::: : ::::::.: ::::::... :.:.: :::::.:: :: gi|747 ALAFDAWLEHTTEMLQMWQVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAAL 180 190 200 210 220 230 240 250 260 270 280 290 KIAA19 KQIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKH .:.:: :. . .: .. .. . :::::.:.::::::::.::... .: :.... :::. gi|747 QQVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKR 240 250 260 270 280 290 300 310 320 330 340 KIAA19 LLARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENT-----EAV--MKNKEKP .:. ... :: ::.:. :: ::.:: :.::.:.::::: : :.. .. .: gi|747 VLSGATLPDKLRDKLKLMKQRRKPPGFLALVKLLREEEEWEATLGPDRESLEGLEVAPRP 300 310 320 330 340 350 350 360 370 380 390 400 KIAA19 SGR--GRGASGRQARAEASVSAPQATVQARSFSDSSPQTIQGGLPPL-----VKRRRLLG .: : :: : ... . :. . : . : .::. ::.: gi|747 PARITGVGAVPLPASGNSFDARPSQGYRRRR---GRGQHRRGGVARAGSRGSRKRKRHTF 360 370 380 390 400 410 410 420 430 440 450 KIAA19 SESTRGED-HGQATYPKAENQTPGREGPQAAGEELGNEAGAGAMSHPKPWET : ::: : .. . : .. ::: : :: : :::: gi|747 CYSC-GEDGHIRVQCINPSNLLLVKQKKQAAVES-GNGNWAWDKSHPKSKAK 420 430 440 450 460 452 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 04:19:38 2009 done: Fri Mar 6 04:24:14 2009 Total Scan time: 1552.470 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]