hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17005569/chunk_1/iprscan-20080502-17005569.nocrc
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Query sequence: KIAA1936
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01753.9.fs MYND finger                                     29.4    7.7e-09   1
PF01753.9.ls MYND finger                                     31.3    3.1e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01753.9.fs   1/1     100   139 ..     1    43 []    29.4  7.7e-09
PF01753.9.ls   1/1     100   139 ..     1    43 []    31.3  3.1e-06

Alignments of top-scoring domains:
PF01753.9.fs: domain 1 of 1, from 100 to 139: score 29.4, E = 7.7e-09
                   *->CanCgreatksrqLkkCsrCknarYCSkeCQrkdWllgHkreC<-*
                      C+ C++  + +     C +C  a+YCS+eC +++W+l+H++eC   
    KIAA1936   100    CHRCLKHTLATV---PCDGCSYAKYCSQECLQQAWELYHRTEC    139  

PF01753.9.ls: domain 1 of 1, from 100 to 139: score 31.3, E = 3.1e-06
                   *->CanCgreatksrqLkkCsrCknarYCSkeCQrkdWllgHkreC<-*
                      C+ C++  + +     C +C  a+YCS+eC +++W+l+H++eC   
    KIAA1936   100    CHRCLKHTLATV---PCDGCSYAKYCSQECLQQAWELYHRTEC    139  

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