hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17261669/chunk_1/iprscan-20080502-17261669.nocrc
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Query sequence: KIAA1951
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00096.16.ls Zinc finger, C2H2 type                         298.9    8.9e-87  14
PF00096.16.fs Zinc finger, C2H2 type                         271.3    1.8e-78  14

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00096.16.ls   3/14    149   172 ..     1    24 []    18.4    0.024
PF00096.16.ls   4/14    206   228 ..     1    24 []    19.8   0.0089
PF00096.16.ls   6/14    314   336 ..     1    24 []    23.0    0.001
PF00096.16.ls   7/14    341   363 ..     1    24 []    27.0  6.1e-05
PF00096.16.fs   7/14    341   363 ..     1    24 []    25.1  5.4e-05
PF00096.16.ls   8/14    369   391 ..     1    24 []    19.2    0.014
PF00096.16.ls  10/14    451   474 ..     1    24 []    26.4  9.7e-05
PF00096.16.fs  10/14    451   474 ..     1    24 []    24.4  7.9e-05
PF00096.16.ls  11/14    481   503 ..     1    24 []    25.7  0.00015
PF00096.16.fs  11/14    481   503 ..     1    24 []    23.7  0.00012
PF00096.16.ls  12/14    509   531 ..     1    24 []    34.8  2.7e-07
PF00096.16.fs  12/14    509   531 ..     1    24 []    32.9  6.1e-07
PF00096.16.fs  13/14    537   559 ..     1    24 []    35.2  1.6e-07
PF00096.16.ls  13/14    537   559 ..     1    24 []    37.1  5.4e-08
PF00096.16.ls  14/14    582   604 ..     1    24 []    19.1    0.015

Alignments of top-scoring domains:
PF00096.16.ls: domain 3 of 14, from 149 to 172: score 18.4, E = 0.024
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      y+C  dC++ F +++   +H++ +H   
    KIAA1951   149    YQCW-DCQELFPSPELWVAHRKAqH    172  

PF00096.16.ls: domain 4 of 14, from 206 to 228: score 19.8, E = 0.0089
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y+Cp +C + + +++++  H+ tH   
    KIAA1951   206    YECP-ECSTLCATPEEFLEHQGTH    228  

PF00096.16.ls: domain 6 of 14, from 314 to 336: score 23.0, E = 0.001
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      + C+ +C++sFs+   L++H r H   
    KIAA1951   314    FHCS-QCQRSFSSANRLQAHGRAH    336  

PF00096.16.ls: domain 7 of 14, from 341 to 363: score 27.0, E = 6.1e-05
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+  C k+F+  ++L++Hlr H   
    KIAA1951   341    HECT-TCSKVFKKAASLEQHLRLH    363  

PF00096.16.fs: domain 7 of 14, from 341 to 363: score 25.1, E = 5.4e-05
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+  C k+F+  ++L++Hlr H   
    KIAA1951   341    HECT-TCSKVFKKAASLEQHLRLH    363  

PF00096.16.ls: domain 8 of 14, from 369 to 391: score 19.2, E = 0.014
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y C  dCg+ F +  +L +H+r H   
    KIAA1951   369    YLCV-DCGRGFGTELTLVAHRRAH    391  

PF00096.16.ls: domain 10 of 14, from 451 to 474: score 26.4, E = 9.7e-05
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                        Cp +C ksF + s L rH+r  H   
    KIAA1951   451    LPCP-QCSKSFASASRLSRHRRAvH    474  

PF00096.16.fs: domain 10 of 14, from 451 to 474: score 24.4, E = 7.9e-05
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                        Cp +C ksF + s L rH+r  H   
    KIAA1951   451    LPCP-QCSKSFASASRLSRHRRAvH    474  

PF00096.16.ls: domain 11 of 14, from 481 to 503: score 25.7, E = 0.00015
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C  +Cgk F+   + ++HlrtH   
    KIAA1951   481    HRCG-VCGKGFKKLIHVRNHLRTH    503  

PF00096.16.fs: domain 11 of 14, from 481 to 503: score 23.7, E = 0.00012
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C  +Cgk F+   + ++HlrtH   
    KIAA1951   481    HRCG-VCGKGFKKLIHVRNHLRTH    503  

PF00096.16.ls: domain 12 of 14, from 509 to 531: score 34.8, E = 2.7e-07
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+  Cgk+F + +nL rH+ tH   
    KIAA1951   509    FQCH-SCGKTFASLANLSRHQLTH    531  

PF00096.16.fs: domain 12 of 14, from 509 to 531: score 32.9, E = 6.1e-07
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+  Cgk+F + +nL rH+ tH   
    KIAA1951   509    FQCH-SCGKTFASLANLSRHQLTH    531  

PF00096.16.fs: domain 13 of 14, from 537 to 559: score 35.2, E = 1.6e-07
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y+C  dCgk+F+++snL++H+r H   
    KIAA1951   537    YQCL-DCGKRFTQSSNLQQHRRLH    559  

PF00096.16.ls: domain 13 of 14, from 537 to 559: score 37.1, E = 5.4e-08
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y+C  dCgk+F+++snL++H+r H   
    KIAA1951   537    YQCL-DCGKRFTQSSNLQQHRRLH    559  

PF00096.16.ls: domain 14 of 14, from 582 to 604: score 19.1, E = 0.015
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y C   Cg+ F+  + L+ H+r+H   
    KIAA1951   582    YYCG-TCGRWFRAMAGLRLHQRVH    604  

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