hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17362856/chunk_1/iprscan-20080502-17362856.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1957
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00168.20.fs C2 domain                                       42.8    3.6e-12   1
PF00168.20.ls C2 domain                                       44.7    2.8e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00168.20.fs   1/1     382   471 ..     1    88 []    42.8  3.6e-12
PF00168.20.ls   1/1     382   471 ..     1    88 []    44.7  2.8e-10

Alignments of top-scoring domains:
PF00168.20.fs: domain 1 of 1, from 382 to 471: score 42.8, E = 3.6e-12
                   *->LrVtvieAknLppkDkkng...ksDPYVkvylggdkkdqkkkTkvik
                      LrV+++ A++L     +  + +++++ V ++l + k  qk+++ ++k
    KIAA1957   382    LRVHLLAAEGLYD---RLCdarSINCCVGLCLVPGKL-QKQRSTIVK 424  

                   ktlNPvWNEtFtFe.vpppdlqe.tLeieVyDydrfgr.ddflGevs<-*
                   ++  Pv+NE+F F+++ p+++ +  L+i+V ++++  ++d +lGe +   
    KIAA1957   425 NSRRPVFNEDFFFDgLGPASVRKlALRIKVVNKGSSLKrDTLLGEKE    471  

PF00168.20.ls: domain 1 of 1, from 382 to 471: score 44.7, E = 2.8e-10
                   *->LrVtvieAknLppkDkkng...ksDPYVkvylggdkkdqkkkTkvik
                      LrV+++ A++L     +  + +++++ V ++l + k  qk+++ ++k
    KIAA1957   382    LRVHLLAAEGLYD---RLCdarSINCCVGLCLVPGKL-QKQRSTIVK 424  

                   ktlNPvWNEtFtFe.vpppdlqe.tLeieVyDydrfgr.ddflGevs<-*
                   ++  Pv+NE+F F+++ p+++ +  L+i+V ++++  ++d +lGe +   
    KIAA1957   425 NSRRPVFNEDFFFDgLGPASVRKlALRIKVVNKGSSLKrDTLLGEKE    471  

//