hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17463216/chunk_1/iprscan-20080502-17463216.nocrc
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Query sequence: KIAA1963
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF03360.6.ls    Glycosyltransferase family 43           434.1   1.7e-127   1
PF03360.6.fs    Glycosyltransferase family 43           432.5   5.4e-127   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF03360.6.fs      1/1     266   473 ..     1   284 []   432.5 5.4e-127
PF03360.6.ls      1/1     266   473 ..     1   284 []   434.1 1.7e-127

Alignments of top-scoring domains:
PF03360.6.fs: domain 1 of 1, from 266 to 473: score 432.5, E = 5.4e-127
                   *->LanTLrlVpnpLHWIVVEDgegttplvsniLartGLptiythlvvkt
                      LanT+r+V + LHWI+VED+ ++++lvs++Lar+GLp   thl+v+t
    KIAA1963   266    LANTFRQVAQ-LHWILVEDAAARSELVSRFLARAGLP--STHLHVPT 309  

                   PstyklrgdePnwvkPRGveQRnlALrwiRehssqilgdgdregVVYFAD
                   P++yk+      + +PR +eQRn++L+w+R++++++  ++   gV++FAD
    KIAA1963   310 PRRYKR------PGLPRATEQRNAGLAWLRQRHQHQRAQP---GVLFFAD 350  

                   DDNtYdLeLFeemIRnvkkvGvWpVGlLAqSGNAEEmVLmekrkemekee
                   DDNtY+LeLF+em R+++kv+vWpVG                        
    KIAA1963   351 DDNTYSLELFQEM-RTTRKVSVWPVG------------------------ 375  

                   eelvgglrVEgPvvnkngtkVvgfhtvwkpeevRpFpvDMAGFAvNlkll
                     lvgg+r+E+P+v+ ng kVvg++t+w+++  RpF++DMAGFAv+l+++
    KIAA1963   376 --LVGGRRYERPLVE-NG-KVVGWYTGWRAD--RPFAIDMAGFAVSLQVI 419  

                   ldnpnAvFpfkvprggeGyqEssfLesLglldlddlEPlPAnnCtksvll
                   l+np+AvF++++++ + G+qEs+fL+++  ++ ++lEP+ AnnCtk    
    KIAA1963   420 LSNPKAVFKRRGSQ-P-GMQESDFLKQI--TTVEELEPK-ANNCTK---- 460  

                   wwLrvearadsklppgwiidpnrEILVWHTRTekpkl<-*
                                           +LVWHTRTek +l   
    KIAA1963   461 ------------------------VLVWHTRTEKVNL    473  

PF03360.6.ls: domain 1 of 1, from 266 to 473: score 434.1, E = 1.7e-127
                   *->LanTLrlVpnpLHWIVVEDgegttplvsniLartGLptiythlvvkt
                      LanT+r+V + LHWI+VED+ ++++lvs++Lar+GLp   thl+v+t
    KIAA1963   266    LANTFRQVAQ-LHWILVEDAAARSELVSRFLARAGLP--STHLHVPT 309  

                   PstyklrgdePnwvkPRGveQRnlALrwiRehssqilgdgdregVVYFAD
                   P++yk+      + +PR +eQRn++L+w+R++++++  ++   gV++FAD
    KIAA1963   310 PRRYKR------PGLPRATEQRNAGLAWLRQRHQHQRAQP---GVLFFAD 350  

                   DDNtYdLeLFeemIRnvkkvGvWpVGlLAqSGNAEEmVLmekrkemekee
                   DDNtY+LeLF+em R+++kv+vWpVG                        
    KIAA1963   351 DDNTYSLELFQEM-RTTRKVSVWPVG------------------------ 375  

                   eelvgglrVEgPvvnkngtkVvgfhtvwkpeevRpFpvDMAGFAvNlkll
                     lvgg+r+E+P+v+ ng kVvg++t+w+++  RpF++DMAGFAv+l+++
    KIAA1963   376 --LVGGRRYERPLVE-NG-KVVGWYTGWRAD--RPFAIDMAGFAVSLQVI 419  

                   ldnpnAvFpfkvprggeGyqEssfLesLglldlddlEPlPAnnCtksvll
                   l+np+AvF++++++ + G+qEs+fL+++  ++ ++lEP+ AnnCtk    
    KIAA1963   420 LSNPKAVFKRRGSQ-P-GMQESDFLKQI--TTVEELEPK-ANNCTK---- 460  

                   wwLrvearadsklppgwiidpnrEILVWHTRTekpkl<-*
                                           +LVWHTRTek +l   
    KIAA1963   461 ------------------------VLVWHTRTEKVNL    473  

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