hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-17481408/chunk_1/iprscan-20080502-17481408.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1964 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00388.9.ls Phosphatidylinositol-specific phospholipa 264.2 2.5e-76 1 PF00388.9.fs Phosphatidylinositol-specific phospholipa 262.2 9.1e-76 1 PF00387.9.ls Phosphatidylinositol-specific phospholipa 192.5 9e-55 1 PF00387.9.fs Phosphatidylinositol-specific phospholipa 190.6 3.4e-54 1 PF09279.1.fs Phosphoinositide-specific phospholipase C 117.2 2.9e-33 1 PF09279.1.ls Phosphoinositide-specific phospholipase C 119.1 1.2e-32 1 PF00168.20.fs C2 domain 73.6 2.5e-21 1 PF00168.20.ls C2 domain 75.6 1.5e-19 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF09279.1.fs 1/1 223 304 .. 1 93 [] 117.2 2.9e-33 PF09279.1.ls 1/1 223 304 .. 1 93 [] 119.1 1.2e-32 PF00388.9.ls 1/1 306 451 .. 1 153 [] 264.2 2.5e-76 PF00388.9.fs 1/1 306 451 .. 1 153 [] 262.2 9.1e-76 PF00387.9.ls 1/1 495 612 .. 1 128 [] 192.5 9e-55 PF00387.9.fs 1/1 495 612 .. 1 128 [] 190.6 3.4e-54 PF00168.20.fs 1/1 630 720 .. 1 88 [] 73.6 2.5e-21 PF00168.20.ls 1/1 630 720 .. 1 88 [] 75.6 1.5e-19 Alignments of top-scoring domains: PF09279.1.fs: domain 1 of 1, from 223 to 304: score 117.2, E = 2.9e-33 *->EIdelFkeYssknkeyLtaedLrrFLneeQrdprlNEiLyPpyteeq E++e+F++Ys+ + +L+a +L++FL e Q+++++ t+++ KIAA1964 223 ELEEIFHQYSG-EDRVLSAPELLEFL-EDQGEEGA--------TLAR 259 aleiIekYEpnegeakekglLsldGFtrYLmSdeNsifnpehldVy<-* a+++I++YE+ne +ak++ l++ldGF++YL+S+e+++++ h V+ KIAA1964 260 AQQLIQTYELNE-TAKQHELMTLDGFMMYLLSPEGAALDNTHTCVF 304 PF09279.1.ls: domain 1 of 1, from 223 to 304: score 119.1, E = 1.2e-32 *->EIdelFkeYssknkeyLtaedLrrFLneeQrdprlNEiLyPpyteeq E++e+F++Ys+ + +L+a +L++FL e Q+++++ t+++ KIAA1964 223 ELEEIFHQYSG-EDRVLSAPELLEFL-EDQGEEGA--------TLAR 259 aleiIekYEpnegeakekglLsldGFtrYLmSdeNsifnpehldVy<-* a+++I++YE+ne +ak++ l++ldGF++YL+S+e+++++ h V+ KIAA1964 260 AQQLIQTYELNE-TAKQHELMTLDGFMMYLLSPEGAALDNTHTCVF 304 PF00388.9.ls: domain 1 of 1, from 306 to 451: score 264.2, E = 2.5e-76 *->dmsiPLsHYfisSshntYLtgkQlwGkssvesYrqqLdaGcRcvELD dm++PL+HYfisSshntYLt +Q++G+ss+e+Y + +GcRcvELD KIAA1964 306 DMNQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELD 352 cwdGkpddepiIyHGhtltleiklkdVleaIkdfafkPtSpyPvIlSlen cw G p +ep+IyHGhtlt++i++ dV++a++d+af+ SpyPvIlSlen KIAA1964 353 CWEG-PGGEPVIYHGHTLTSKILFRDVVQAVRDHAFT-LSPYPVILSLEN 400 HcnsddqQrkmakyfkeiFgdmLltkPtlds.lttepglpLPslkdlrgK Hc + qQ+ ma+++ +i+gdmL+t lds+ ++e LPs+++l+g+ KIAA1964 401 HCGLE-QQAAMARHLCTILGDMLVTQA-LDSpNPEE----LPSPEQLKGR 444 ILLknkk<-* L+k+kk KIAA1964 445 VLVKGKK 451 PF00388.9.fs: domain 1 of 1, from 306 to 451: score 262.2, E = 9.1e-76 *->dmsiPLsHYfisSshntYLtgkQlwGkssvesYrqqLdaGcRcvELD dm++PL+HYfisSshntYLt +Q++G+ss+e+Y + +GcRcvELD KIAA1964 306 DMNQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELD 352 cwdGkpddepiIyHGhtltleiklkdVleaIkdfafkPtSpyPvIlSlen cw G p +ep+IyHGhtlt++i++ dV++a++d+af+ SpyPvIlSlen KIAA1964 353 CWEG-PGGEPVIYHGHTLTSKILFRDVVQAVRDHAFT-LSPYPVILSLEN 400 HcnsddqQrkmakyfkeiFgdmLltkPtlds.lttepglpLPslkdlrgK Hc + qQ+ ma+++ +i+gdmL+t lds+ ++e LPs+++l+g+ KIAA1964 401 HCGLE-QQAAMARHLCTILGDMLVTQA-LDSpNPEE----LPSPEQLKGR 444 ILLknkk<-* L+k+kk KIAA1964 445 VLVKGKK 451 PF00387.9.ls: domain 1 of 1, from 495 to 612: score 192.5, E = 9e-55 *->ElsnLvnYiqsikFrsFelsGeekntsyeisSFsErkvkakkllkes Els+L+ Y++ + r + ++sS+sEr kakkl e+ KIAA1964 495 ELSALAVYCHATRLRTLHPA-PNAPQPCQVSSLSER--KAKKLIREA 538 pvefVkyNkrqLsRvYPkGtRvDSSNfmPqvfWnaGCQmVALNfQTsDlp +++fV++N rqL RvYP G+R+ S N++Pq++Wn GCQ+VALNfQT++ + KIAA1964 539 GNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYE 588 mqiNdGmFeyNggqPdGsfksGYlLKPeflR<-* m++N G+F+ Ng+ +GY+LKP++lR KIAA1964 589 MDLNAGRFLVNGQ-------CGYVLKPACLR 612 PF00387.9.fs: domain 1 of 1, from 495 to 612: score 190.6, E = 3.4e-54 *->ElsnLvnYiqsikFrsFelsGeekntsyeisSFsErkvkakkllkes Els+L+ Y++ + r + ++sS+sEr kakkl e+ KIAA1964 495 ELSALAVYCHATRLRTLHPA-PNAPQPCQVSSLSER--KAKKLIREA 538 pvefVkyNkrqLsRvYPkGtRvDSSNfmPqvfWnaGCQmVALNfQTsDlp +++fV++N rqL RvYP G+R+ S N++Pq++Wn GCQ+VALNfQT++ + KIAA1964 539 GNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYE 588 mqiNdGmFeyNggqPdGsfksGYlLKPeflR<-* m++N G+F+ Ng+ +GY+LKP++lR KIAA1964 589 MDLNAGRFLVNGQ-------CGYVLKPACLR 612 PF00168.20.fs: domain 1 of 1, from 630 to 720: score 73.6, E = 2.5e-21 *->LrVtvieAknLppkDk..kngksDPYVkvylggdkkd.qkkkTkvik L++ v+ A+ Lp+ + +++ + +DP V+++++g++ d ++ T + KIAA1964 630 LSIQVLTAQQLPKLNAekPHSIVDPLVRIEIHGVPADcARQETDYVL 676 kt.lNPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* ++++NP+W +t++F++ p+l+ +++ V Dyd + +df+G+++ KIAA1964 677 NNgFNPRWGQTLQFQLRAPELAL-VRFVVEDYDATSPNDFVGQFT 720 PF00168.20.ls: domain 1 of 1, from 630 to 720: score 75.6, E = 1.5e-19 *->LrVtvieAknLppkDk..kngksDPYVkvylggdkkd.qkkkTkvik L++ v+ A+ Lp+ + +++ + +DP V+++++g++ d ++ T + KIAA1964 630 LSIQVLTAQQLPKLNAekPHSIVDPLVRIEIHGVPADcARQETDYVL 676 kt.lNPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* ++++NP+W +t++F++ p+l+ +++ V Dyd + +df+G+++ KIAA1964 677 NNgFNPRWGQTLQFQLRAPELAL-VRFVVEDYDATSPNDFVGQFT 720 //