hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18332292/chunk_1/iprscan-20080502-18332292.nocrc
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Query sequence: KIAA1991
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00097.15.fs Zinc finger, C3HC4 type (RING finger)           29.2    6.9e-10   1
PF00097.15.ls Zinc finger, C3HC4 type (RING finger)           31.0    3.9e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00097.15.fs   1/1      72   110 ..     1    50 []    29.2  6.9e-10
PF00097.15.ls   1/1      72   110 ..     1    50 []    31.0  3.9e-06

Alignments of top-scoring domains:
PF00097.15.fs: domain 1 of 1, from 72 to 110: score 29.2, E = 6.9e-10
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C+ Cle++ e+       lpCgHs      Cr C +r  +  +   C
    KIAA1991    72    CAGCLEPPGEAA-----ALPCGHS-----LCRGCAQRAAD-AAGPGC 107  

                   plC<-*
                   p C   
    KIAA1991   108 PRC    110  

PF00097.15.ls: domain 1 of 1, from 72 to 110: score 31.0, E = 3.9e-06
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C+ Cle++ e+       lpCgHs      Cr C +r  +  +   C
    KIAA1991    72    CAGCLEPPGEAA-----ALPCGHS-----LCRGCAQRAAD-AAGPGC 107  

                   plC<-*
                   p C   
    KIAA1991   108 PRC    110  

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