hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-19473373/chunk_1/iprscan-20080502-19473373.nocrc
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Query sequence: KIAA2035
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00642.15.fs Zinc finger C-x8-C-x5-C-x3-H type (and simil    67.2    1.2e-21   3
PF00642.15.ls Zinc finger C-x8-C-x5-C-x3-H type (and simil    67.3    4.5e-17   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00642.15.fs   1/3     219   244 ..     1    27 []    29.2  6.3e-09
PF00642.15.ls   1/3     219   244 ..     1    27 []    31.1  3.5e-06
PF00642.15.fs   2/3     248   273 ..     1    27 []    26.1  6.8e-08
PF00642.15.ls   2/3     248   273 ..     1    27 []    28.1    3e-05
PF00642.15.ls   3/3     275   297 ..     1    27 []     8.1      0.1

Alignments of top-scoring domains:
PF00642.15.fs: domain 1 of 3, from 219 to 244: score 29.2, E = 6.3e-09
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                      +++ +C++f++ G+C  Gd+CkF H+    
    KIAA2035   219    KGKQICKYFLE-GRCIKGDQCKFDHDA    244  

PF00642.15.ls: domain 1 of 3, from 219 to 244: score 31.1, E = 3.5e-06
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                      +++ +C++f++ G+C  Gd+CkF H+    
    KIAA2035   219    KGKQICKYFLE-GRCIKGDQCKFDHDA    244  

PF00642.15.fs: domain 2 of 3, from 248 to 273: score 26.1, E = 6.8e-08
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                      +++e+C+f+++ G+C  G++C ++H e   
    KIAA2035   248    KRKEICKFYLQ-GYCTKGENCIYMHNE    273  

PF00642.15.ls: domain 2 of 3, from 248 to 273: score 28.1, E = 3e-05
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                      +++e+C+f+++ G+C  G++C ++H e   
    KIAA2035   248    KRKEICKFYLQ-GYCTKGENCIYMHNE    273  

PF00642.15.ls: domain 3 of 3, from 275 to 297: score 8.1, E = 0.1
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                          +C+f++ +  C  Gd+CkF+H++   
    KIAA2035   275    ----PCKFYHSGAKCYQGDNCKFSHDD    297  

//