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Order Kazusa clone(s) from : |
| Product ID | ORK00575 |
|---|---|
| Accession No | AB014513 |
| Description | LIM domain binding 3, transcript variant 1 |
| Clone name | hg01088b |
| Vector information | |
| cDNA sequence | DNA sequence (4223 bp) Predicted protein sequence (734 aa) |
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HaloTag ORF Clone |
FHC00575
|
| Flexi ORF Clone | FXC00575 |
| Source | Human adult brain |
| Rouge ID |
mKIAA0613
by Kazusa Mouse cDNA Project
|
Length: 4223 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).
| N-terminal truncation | Coding interruption | |
|---|---|---|
| cloned DNA seq | Warning | No warning |
Length: 734 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database
(FASTA output,
Multiple alignment)
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR001781 | 556 | 610 | PD000094 | Zinc finger |
| IPR001781 | 615 | 671 | PD000094 | Zinc finger | |
| IPR001781 | 674 | 728 | PD000094 | Zinc finger | |
| HMMPfam | IPR001478 | 11 | 88 | PF00595 | PDZ/DHR/GLGF |
| IPR001781 | 558 | 614 | PF00412 | Zinc finger | |
| IPR001781 | 617 | 673 | PF00412 | Zinc finger | |
| IPR001781 | 676 | 733 | PF00412 | Zinc finger | |
| HMMSmart | IPR001478 | 18 | 91 | SM00228 | PDZ/DHR/GLGF |
| IPR006643 | 196 | 221 | SM00735 | ZASP | |
| IPR001781 | 557 | 608 | SM00132 | Zinc finger | |
| IPR001781 | 616 | 667 | SM00132 | Zinc finger | |
| IPR001781 | 675 | 728 | SM00132 | Zinc finger | |
| ProfileScan | IPR001478 | 9 | 91 | PS50106 | PDZ/DHR/GLGF |
| IPR001781 | 556 | 614 | PS50023 | Zinc finger | |
| IPR001781 | 615 | 674 | PS50023 | Zinc finger | |
| IPR001781 | 675 | 734 | PS50023 | Zinc finger | |
| ScanRegExp | IPR001781 | 617 | 650 | PS00478 | Zinc finger |
| IPR001781 | 676 | 711 | PS00478 | Zinc finger |
RT-PCR
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|---|
RT-PCR-ELISA
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Experimental conditions| Primer_f | TGAATACAAAGCAGCAGGCAG |
|---|---|
| Primer_r | TGGAGAAAATGACTTAGAGCC |
| PCR conditions | 95 °C 30 sec 55 °C 30 sec 72 °C 60 sec 30 cycles![]() |
Chromosome No. 10
Experimental conditions| Panel name | GeneBridge 4 |
|---|---|
| Primer_f | TGAATACAAAGCAGCAGGCAG |
| Primer_r | TGGAGAAAATGACTTAGAGCC |
| PCR product length | 165 bp |
| PCR conditions | 95 °C 15 sec 64 °C 60 sec 30 cycles |