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Gene/Protein Characteristic Table for KIAA0746

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Product ID	ORK05618
Accession No	AB018289
Description	sel-1 suppressor of lin-12-like 3 (C. elegans), transcript variant 3
Clone name	hk04140
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4086 bp) Predicted protein sequence (1029 aa)
HaloTag ORF Clone	FHC05618
Flexi ORF Clone	FXC05618
Source	Human adult brain
Rouge ID	mKIAA0746 by Kazusa Mouse cDNA Project

Length: 4086 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1029 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR006597	586	622	PF08238	Sel1-like
	IPR006597	624	659	PF08238	Sel1-like
	IPR006597	660	692	PF08238	Sel1-like
	IPR006597	693	731	PF08238	Sel1-like
	IPR006597	844	880	PF08238	Sel1-like
HMMSmart	IPR006597	467	501	SM00671	Sel1-like
	IPR006597	503	539	SM00671	Sel1-like
	IPR006597	586	622	SM00671	Sel1-like
	IPR006597	624	659	SM00671	Sel1-like
	IPR006597	660	692	SM00671	Sel1-like
	IPR006597	693	731	SM00671	Sel1-like
	IPR006597	732	769	SM00671	Sel1-like
	IPR006597	844	880	SM00671	Sel1-like

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	1	LCSQPCVVNLEAVVSSEFRSSIP	23	SECONDARY	23
	2	945	LHLRLLWGAILHSALIYFLGTFL	967	PRIMARY	23

RT-PCR-ELISA

Experimental conditions

Chromosome No. 4
Experimental conditions

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