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Gene/Protein Characteristic Table for FLJ00034

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Product ID	ORK03385
Accession No	AK024444
Clone name	as00034
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4305 bp) Predicted protein sequence (1343 aa)
HaloTag ORF Clone	FHC03385
Flexi ORF Clone	FXC03385
Source	Human spleen
Rouge ID	mFLJ00034 by Kazusa Mouse cDNA Project

Length: 4305 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1343 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR003993	919	937	PR01503	Treacher Collins syndrome protein Treacle
	IPR003993	1053	1066	PR01503	Treacher Collins syndrome protein Treacle
ProfileScan	IPR000694	215	298	PS50099	Proline-rich region
	NULL	222	238	PS50324	NULL
	NULL	299	319	PS50313	NULL
	IPR000694	411	472	PS50099	Proline-rich region
	NULL	565	859	PS50324	NULL
	NULL	587	685	PS50323	NULL
	IPR001472	624	641	PS50079	Bipartite nuclear localization signal
	NULL	927	957	PS50318	NULL
	NULL	1040	1070	PS50313	NULL
	IPR000694	1315	1342	PS50099	Proline-rich region

RT-PCR-ELISA

Experimental conditions

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