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Gene/Protein Characteristic Table for FLJ00078

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Product ID	ORK07222
Accession No	AK074032
Clone name	as00078
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector. Caution: this cDNA clone as00078 has an irregular adapter sequence (GTCGACCCAC GCCGTCCG) instead of regular one (GTCGACCCAC GCGTCCG).
cDNA sequence	DNA sequence (4284 bp) Predicted protein sequence (103 aa)
Source	Human spleen

Length: 4284 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 103 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
ProfileScan	IPR002111	1	68	PS50272	Cation (not K+) channel

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	42	LFLLITYVILTFVLLLNMLIALM	64	PRIMARY	23

Experimental conditions

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