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Gene/Protein Characteristic Table for FLJ00105

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Product ID	ORK06844
Accession No	AK024497
Clone name	as00105
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4143 bp) Predicted protein sequence (721 aa)
Source	Human spleen

Length: 4143 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 721 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
ProfileScan	IPR002293	58	235	PS50285	Amino acid/polyamine transporter I

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	1	EIQGIPGAASGVFLENLWSTYAH	23	SECONDARY	23
	2	49	YVLTDIAASFTLLVGIYFPSVTG	71	SECONDARY	23
	3	94	ILAIVTTSFIYLSCIVLFGACIE	116	PRIMARY	23
	4	131	NLVIGMLAWPSPWVIVIGSFFST	153	SECONDARY	23
	5	193	TWALLLTVLICETGILIASLDSV	215	PRIMARY	23
	6	219	LSMFFLMCYLFVNLACAVQTLLR	241	PRIMARY	23
	7	260	GMSLCLALMFICSWYYALSAMLI	282	PRIMARY	23

Experimental conditions

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