KIAA1767

Product ID	ORK07103
Accession No	AB051554
Description	thyroid adenoma associated
Clone name	eg01735
Vector information	The cDNA fragment was inserted at the XhoI-SacI site of the ... The cDNA fragment was inserted at the XhoI-SacI site of the pBC SK+ vector(Cm resistance; http://www.kazusa.or.jp/huge/vectorinfo/pbcskp_s.txt) with sequences including attB1 and attB2 sites (CTCGAGCAGC TGAAGCTTTC ACAAGTTTGT ACAAAAAAGC AGGCTCTTC-5' end of cDNA, GAGCTCTCAC CACTTTGTAC AAGAAAGCTG GGCGGCCGCT TTTTTTTTTT TTTTTTT-3' end of cDNA).
cDNA sequence	DNA sequence (6310 bp) Predicted protein sequence (1960 aa)
Source
Rouge ID	mKIAA1767 by Kazusa Mouse cDNA Project
Note	We replaced fj17894, former representative clones for KIAA1767 with eg01735. (2005/08/06)

Length: 6310 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis).

	N-terminal truncation	Coding interruption
cloned DNA seq	No warning	No warning

Integrity of 3' end

Length of 3'UTR	96 bp
Genome contig ID	gi89161199r_43211495
PolyA signal sequence (CATAAA,-23)	+--------+--------+----*----+---- AAACATGTTGAACATAAATTCAAAAATTTTATCCC
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* ATTCATGCCTCCCCTACTTCTGTGAGTCCAGTCGTCTGTCACTCCTTACA

Ensembl ContigView (Add our DAS server as a DAS source)

	Chr	f/r	start	end	exon	identity	class
Ensembl gnome browser	2	r	43311495	43676617	38	99.8	Perfect prediction

Length: 1960 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAF82712	100.0	unnamed protein...	Homo sapiens
Q6YHU6	99.9	Thyroid adenoma...	Homo sapiens
XP_001141732	99.1	thyroid adenoma...	Pan troglodytes
A8C752	95.8	Thyroid adenoma...	Chlorocebus aet...
XP_001499013	84.0	similar to thyr...	Equus caballus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
ScanRegExp	IPR000292	1500	1509	PS01005	Formate/nitrite transporter

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	1776	FCQVDASIALALALAVLCDLLQQ	1798	PRIMARY	23
SOSUI2	2	1843	FWAETLIFVKYLCKHLFCLLSKS	1865	SECONDARY	23

Primer_f	CCCATCCTATTCTTGAGTTGC
Primer_r	TGGCAGGTATTTTCTTGTGAC
PCR conditions	95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

Panel name	unigene
Primer_f	-
Primer_r	-
PCR product length	-
PCR conditions	-