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Other countries |
Product ID | ORK00634 |
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Accession No | AB018321 |
Description | ATPase, Na+/K+ transporting, alpha 2 polypeptide |
Clone name | fh12074 |
Vector information | |
cDNA sequence | DNA sequence (5411 bp) Predicted protein sequence (1049 aa) |
HaloTag ORF Clone |
FHC00634
|
Flexi ORF Clone | FXC00634 |
Source | Human fetal brain |
Rouge ID |
mKIAA0778
by Kazusa Mouse cDNA Project
|
Note | We replaced hk05292, former representative clones for KIAA0778 with fh12074. (2002/5/10) |
N-terminal truncation | Coding interruption | |
---|---|---|
cloned DNA seq | Warning | No warning |
Length of 3'UTR | 2259 bp |
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Genome contig ID | gi89161185f_158252187 |
PolyA signal sequence (AATAAA,-22) |
+----*----+----*----+----*----+---- |
Flanking genome sequence (127811 - 127860) |
----+----*----+----*----+----*----+----*----+----* |
Ensembl ContigView (Add our DAS server as a DAS source)
Chr | f/r | start | end | exon | identity | class | |
---|---|---|---|---|---|---|---|
| 1 | f | 158352187 | 158379996 | 23 | 99.5 | Perfect prediction |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.Result of homology search against HUGE database (FASTA output, Multiple alignment)
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Search method | interpro_ID | From | To | Entry | Definition |
---|---|---|---|---|---|
FPrintScan | IPR006069 | 130 | 144 | PR00121 | ATPase |
IPR006069 | 157 | 177 | PR00121 | ATPase | |
IPR001757 | 241 | 255 | PR00119 | ATPase | |
IPR006069 | 321 | 343 | PR00121 | ATPase | |
IPR006069 | 394 | 415 | PR00121 | ATPase | |
IPR001757 | 401 | 415 | PR00119 | ATPase | |
IPR006069 | 531 | 549 | PR00121 | ATPase | |
IPR001757 | 613 | 624 | PR00119 | ATPase | |
IPR001757 | 635 | 645 | PR00119 | ATPase | |
IPR001757 | 741 | 760 | PR00119 | ATPase | |
IPR001757 | 765 | 777 | PR00119 | ATPase | |
IPR006069 | 813 | 834 | PR00121 | ATPase | |
IPR006069 | 880 | 900 | PR00121 | ATPase | |
IPR006069 | 942 | 962 | PR00121 | ATPase | |
IPR006069 | 976 | 1000 | PR00121 | ATPase | |
HMMPfam | IPR004014 | 60 | 143 | PF00690 | ATPase |
IPR008250 | 162 | 393 | PF00122 | E1-E2 ATPase-associated region | |
IPR005834 | 397 | 764 | PF00702 | Haloacid dehalogenase-like hydrolase | |
IPR006068 | 860 | 1038 | PF00689 | ATPase | |
HMMTigr | IPR005775 | 54 | 1049 | TIGR01106 | ATPase |
IPR001757 | 162 | 254 | TIGR01494 | ATPase | |
IPR001757 | 306 | 431 | TIGR01494 | ATPase | |
IPR001757 | 610 | 660 | TIGR01494 | ATPase | |
IPR001757 | 715 | 834 | TIGR01494 | ATPase | |
ScanRegExp | IPR001757 | 403 | 409 | PS00154 | ATPase |
Method | No. | N terminal | transmembrane region | C terminal | type | length | SOSUI2 | 1 | 2 | RLSQTGWCGLGILLVTSPAKVPQ | 24 | SECONDARY | 23 | 2 | 125 | GGFSILLWIGAILCFLAYGIQAA | 147 | PRIMARY | 23 | 3 | 157 | LYLGVVLAAVVIVTGCFSYYQ | 177 | PRIMARY | 21 | 4 | 319 | IQLITGVAVFLGVSFFVLSLILG | 341 | PRIMARY | 23 | 5 | 351 | LIGIIVANVPEGLLATVTVCLTL | 373 | PRIMARY | 23 | 6 | 821 | IANIPLPLGTVTILCIDLGTDMV | 843 | SECONDARY | 23 | 7 | 941 | EFTCHTAFFASIVVVQWADLIIC | 963 | SECONDARY | 23 | 8 | 981 | IFGLLEETALAAFLSYCPGMGVA | 1003 | SECONDARY | 23 | 9 | 1009 | LKVTWWFCAFPYSLLIFIYDEV | 1030 | PRIMARY | 22 |
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RT-PCR-ELISA |
Primer_f | TGGAGATTACTAACTGTGGAC |
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Primer_r | GATAATTAGCCCATGCACTCG |
PCR conditions | 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles |
Panel name | UniGene |
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Primer_f | - |
Primer_r | - |
PCR product length | - |
PCR conditions | - |