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Order Kazusa clone(s) from : |
| Product ID | ORK03291 |
|---|---|
| Accession No | D86963 |
| Description | dishevelled segment polarity protein 3 |
| Clone name | ha02713 |
| Vector information | |
| cDNA sequence | DNA sequence (5146 bp) Predicted protein sequence (748 aa) |
|
HaloTag ORF Clone |
FHC03291
|
| Flexi ORF Clone | FXC03291 |
| Source | Myeloblast cell line (KG-1) |
| Rouge ID |
mKIAA0208
by Kazusa Mouse cDNA Project
|
Length: 5146 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).
| N-terminal truncation | Coding interruption | |
|---|---|---|
| cloned DNA seq | No warning | No warning |
Ensembl ContigView (Add our DAS server as a DAS source)
| Chr | f/r | start | end | exon | identity | class | |
|---|---|---|---|---|---|---|---|
|
| 3 | f | 185355978 | 185374092 | 15 | 99.4 | Perfect prediction |
Length: 748 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database
(FASTA output,
Multiple alignment)
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR001158 | 35 | 120 | PD003639 | DIX |
| FPrintScan | IPR008339 | 356 | 370 | PR01760 | Dishevelled region |
| IPR008339 | 390 | 402 | PR01760 | Dishevelled region | |
| IPR008339 | 485 | 495 | PR01760 | Dishevelled region | |
| IPR008339 | 511 | 522 | PR01760 | Dishevelled region | |
| IPR008342 | 531 | 541 | PR01763 | Dishevelled-3 protein | |
| IPR008342 | 583 | 592 | PR01763 | Dishevelled-3 protein | |
| IPR008342 | 617 | 628 | PR01763 | Dishevelled-3 protein | |
| IPR008342 | 666 | 677 | PR01763 | Dishevelled-3 protein | |
| HMMPfam | IPR001158 | 33 | 114 | PF00778 | DIX |
| IPR003351 | 174 | 245 | PF02377 | Dishevelled protein | |
| IPR001478 | 281 | 366 | PF00595 | PDZ/DHR/GLGF | |
| IPR000591 | 454 | 526 | PF00610 | Pleckstrin/ G-protein | |
| HMMSmart | IPR001158 | 33 | 114 | SM00021 | DIX |
| IPR001478 | 290 | 369 | SM00228 | PDZ/DHR/GLGF | |
| IPR000591 | 454 | 528 | SM00049 | Pleckstrin/ G-protein | |
| ProfileScan | IPR001158 | 33 | 114 | PS50841 | DIX |
| IPR001478 | 281 | 353 | PS50106 | PDZ/DHR/GLGF | |
| IPR000591 | 454 | 528 | PS50186 | Pleckstrin/ G-protein |
Chromosome No. 3
Experimental conditions| Panel name | Genebridge 4 |
|---|---|
| Primer_f | AGCATGGGATTTGGAGTTAGG |
| Primer_r | TTACATACGAGGGAACTGAGG |
| PCR product length | 110 bp |
| PCR conditions | 95 °C 15 sec 66 °C 60 sec 30 cycles |