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Order Kazusa clone(s) from : |
| Product ID | ORK04963 |
|---|---|
| Accession No | AB095940 |
| Description | NUT family member 2A |
| Clone name | ph01249 |
| Vector information | |
| cDNA sequence | DNA sequence (5858 bp) Predicted protein sequence (572 aa) |
| Source | Human brain (hippocampus) |
Length: 5858 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).
| N-terminal truncation | Coding interruption | |
|---|---|---|
| cloned DNA seq | No warning | No warning |
Ensembl ContigView (Add our DAS server as a DAS source)
| Chr | f/r | start | end | exon | identity | class | |
|---|---|---|---|---|---|---|---|
|
| 10 | f | 88975237 | 89120432 | 8 | 99.1 | Perfect prediction |
|
| 10 | f | 81453240 | 81604115 | 8 | 99.0 | Perfect prediction |
Length: 572 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database
(FASTA output,
Multiple alignment)
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| None | - | - | - | - | - |
Prediction of transmembrane (TM) segments| Method | No. | N terminal | transmembrane region | C terminal | type | length | SOSUI2 | 1 | 182 | GGVVCPPPLLLAAAPVVPVMAAQ | 204 | PRIMARY | 23 |
|---|
RT-PCR-ELISA
|
Experimental conditions| Primer_f | GAAGTGGTGCAGGAGTATGTG |
|---|---|
| Primer_r | ATGAATGACGGCCTCCACCTT |
| PCR conditions | 95 °C 30 sec 55 °C 30 sec 72 °C 60 sec 30 cycles![]() |
Chromosome No. 10
Experimental conditions| Panel name | genbank |
|---|---|
| Primer_f | - |
| Primer_r | - |
| PCR product length | - |
| PCR conditions | - |