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Gene/Protein Characteristic Table for FLJ00413

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Product ID	ORK05406
Accession No	AK122588
Clone name	sg00013
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (6414 bp) Predicted protein sequence (308 aa)
Source	Human spleen

Length: 6414 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 308 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR000286	49	72	PR01270	Histone deacetylase superfamily
	IPR000286	83	98	PR01270	Histone deacetylase superfamily
	IPR000286	174	184	PR01270	Histone deacetylase superfamily
HMMPfam	IPR000286	1	248	PF00850	Histone deacetylase superfamily

Experimental conditions

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