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Gene/Protein Characteristic Table for FLJ00348

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Product ID	ORK05169
Accession No	AK090431
Clone name	sg00015
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (6604 bp) Predicted protein sequence (778 aa)
Source	Human spleen
Rouge ID	mFLJ00348 by Kazusa Mouse cDNA Project

Length: 6604 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 778 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR007111	156	322	PF05729	NACHT nucleoside triphosphatase
HMMSmart	IPR003590	682	709	SM00368	Leucine-rich repeat
	IPR003590	710	737	SM00368	Leucine-rich repeat
ProfileScan	IPR007111	156	288	PS50837	NACHT nucleoside triphosphatase
	IPR007091	662	746	PS50503	Leucine-rich repeat
ScanRegExp	IPR000566	92	104	PS00213	Lipocalin-related protein and Bos/Can/Equ allergen
	IPR001395	703	718	PS00063	Aldo/keto reductase

Experimental conditions

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