FLJ00132

Product ID	ORK07249
Accession No	AK074061
Clone name	sh02007
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5060 bp) Predicted protein sequence (572 aa)
Source	Human spleen
Rouge ID	mFLJ00132 by Kazusa Mouse cDNA Project

	N-terminal truncation	Coding interruption
cloned DNA seq	Warning	Warning

Length: 572 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAB84887	7.7e-192	100.0	FLJ00132 protei...	Homo sapiens
Q9H6E5	1.8e-162	100.0	U6 snRNA-specif...	Homo sapiens
BAF85299	1.8e-162	100.0	unnamed protein...	Homo sapiens
BAB15314	5.4e-162	99.8	unnamed protein...	Homo sapiens
XP_508491	7.8e-162	99.6	RNA binding mot...	Pan troglodytes

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
D83776	5e-06	37.4	KIAA0191
AB051498	6.6e-06	42.0	KIAA1711

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000504	73	138	PF00076	RNA-binding region RNP-1 (RNA recognition motif)
HMMSmart	IPR000504	72	139	SM00360	RNA-binding region RNP-1 (RNA recognition motif)
ProfileScan	IPR000504	71	143	PS50102	RNA-binding region RNP-1 (RNA recognition motif)
	IPR001201	372	462	PS50153	PAP/25A core domain
	IPR001201	420	462	PS50154	PAP/25A core domain

Primer_f
Primer_r
PCR conditions	test