FLJ00268

Product ID	ORK07709
Accession No	AK160367
Clone name	sj05723
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4710 bp) Predicted protein sequence (695 aa)
Source	Human spleen
Rouge ID	mFLJ00268 by Kazusa Mouse cDNA Project

	N-terminal truncation	Coding interruption
cloned DNA seq	Warning	Warning

Length: 695 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAD18710	0	100.0	FLJ00268 protei...	Homo sapiens
EAW61352	5e-135	66.0	hCG2040574 [Hom...	Homo sapiens
XP_001093501	3.5e-99	76.2	similar to dele...	Macaca mulatta
XP_001926649	1e-96	67.6	similar to scav...	Sus scrofa
XP_597136	2.9e-93	49.4	similar to scav...	Bos taurus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB058725	2.5e-07	42.2	KIAA1822

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR001190	35	126	PF00530	Speract/scavenger receptor
	IPR001190	131	228	PF00530	Speract/scavenger receptor
	IPR001190	237	334	PF00530	Speract/scavenger receptor
	IPR001190	362	448	PF00530	Speract/scavenger receptor
HMMSmart	IPR001190	32	126	SM00202	Speract/scavenger receptor
	IPR001190	128	228	SM00202	Speract/scavenger receptor
	IPR001190	234	334	SM00202	Speract/scavenger receptor
	IPR001190	353	461	SM00202	Speract/scavenger receptor
ProfileScan	IPR001190	32	126	PS50287	Speract/scavenger receptor
	IPR001190	128	228	PS50287	Speract/scavenger receptor
	IPR001190	234	334	PS50287	Speract/scavenger receptor
	IPR001190	355	408	PS50287	Speract/scavenger receptor
	NULL	583	686	PS50323	NULL
ScanRegExp	IPR000408	226	236	PS00626	Regulator of chromosome condensation

Primer_f
Primer_r
PCR conditions	test