FLJ00394

Product ID	ORK07710
Accession No	AK090473
Clone name	sj05987
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4600 bp) Predicted protein sequence (238 aa)
Source	Human spleen
Rouge ID	mFLJ00394 by Kazusa Mouse cDNA Project

Length: 4600 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis).

	N-terminal truncation	Coding interruption
cloned DNA seq	No warning	Warning

Length: 238 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAC03454	2.5e-96	100.0	FLJ00394 protei...	Homo sapiens
XP_512287	1.6e-16	70.7	similar to UBX ...	Pan troglodytes
AAH07414	1.6e-16	70.7	UBXN6 protein [...	Homo sapiens
XP_001138590	1.8e-16	70.7	UBX domain cont...	Pan troglodytes
AAK13258	2e-16	70.7	UBX domain-cont...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

No significant homologues

Primer_f
Primer_r
PCR conditions	test