HUGE

Gene/Protein Characteristic Table for KIAA0257

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK07141
Accession No. :	D87446
Description :	Transmembrane protein 131 (Fragment).
HUGO Gene Name :	transmembrane protein 131 (TMEM131)
Clone Name :	ha07065 [Vector Info]
Source :	Myeloblast cell line (KG-1)

Features of the cloned DNA sequence	Description

Length: 6178 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 759 bp

Genome contig ID gi89161199r_97639235
PolyA signal sequence
(AATAAA,-19)
+----*----+----*----+----*----+----
TTGTGTTGTACTTTGAAATAAATGATGCTTTTTTC
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAAAGCCTTGTTTTGTGGTTTTTTTTACACACAAGGTGTATTTATTAGGA

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 2 r 97739235 97891602 39 99.9 Terminal No-hit

Features of the protein sequence	Description

Length: 1805 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
Q92545	100.0	Transmembrane p...	Homo sapiens
NP_056163	100.0	RW1 protein [Ho...	Homo sapiens
EAX01916	99.9	hCG1735290, iso...	Homo sapiens
XP_515638	99.6	RW1 protein iso...	Pan troglodytes
XP_001155973	99.6	RW1 protein iso...	Pan troglodytes

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

None - - - - -

Search method	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

SOSUI2 1 1040 LALYIIISGIMSALFLLVIGTAY 1062 PRIMARY 23

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	1040	LALYIIISGIMSALFLLVIGTAY	1062	PRIMARY	23

Expression profile	Description

: Northern blot Description

Northern blot	Description

RH mapping information	Description

Chromosome No.

: 2

Experimental conditions

Panel name	: Genebridge 4
Primer_f	: CATGAGATTTGCTGTTGTGCT
Primer_r	: ATAAAGCATGGGGAAGACAGG
PCR product length	: 125 bp
PCR conditions	: 95 °C15 sec62 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	759 bp
Genome contig ID	gi89161199r_97639235
PolyA signal sequence (AATAAA,-19)	+--------+--------+----*----+---- TTGTGTTGTACTTTGAAATAAATGATGCTTTTTTC
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* AAAAGCCTTGTTTTGTGGTTTTTTTTACACACAAGGTGTATTTATTAGGA

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	2	r	97739235	97891602	39	99.9	Terminal No-hit

Gene/Protein Characteristic Table for KIAA0257

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information