HUGE

Gene/Protein Characteristic Table for KIAA0599

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK06397
Accession No. :	AB011171
Description :	pleckstrin homology domain containing, family G, member 3.
HUGO Gene Name :
Clone Name :	hj03137 [Vector Info]
Flexi ORF Clone :	pF1KA0599
Source :	Human adult brain

Features of the cloned DNA sequence	Description

Length: 5282 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 3188 bp

Genome contig ID gi51511730f_64177555
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
TACTGTCAAAAGACTGTAGAGTAGAATAAGGAGAG
Flanking genome sequence
(105810 - 105859)
----+----*----+----*----+----*----+----*----+----*
AAAAAAAAAAAAAGACCTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTG

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 14 f 64277555 64283363 2 99.3 Perfect prediction

Features of the protein sequence	Description

Length: 697 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
AAH73907	100.0	PLEKHG3 protein...	Homo sapiens
BAB84995	100.0	FLJ00242 protei...	Homo sapiens
NP_056364	100.0	pleckstrin homo...	Homo sapiens
A1L390	100.0	Pleckstrin homo...	Homo sapiens
AAI29953	99.9	PLEKHG3 protein...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR Description

Experimental conditions

Primer_f
: TCCCACAGCCAGAGTCAGTTG

Primer_r
: TGACAGTATTCCCAAACGAGG

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR	Description

RH mapping information	Description

Chromosome No.

: 14

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: TCCCACAGCCAGAGTCAGTTG
Primer_r	: TGACAGTATTCCCAAACGAGG
PCR product length	: 165 bp
PCR conditions	: 95 °C15 sec64 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	3188 bp
Genome contig ID	gi51511730f_64177555
PolyA signal sequence (None)	+--------+--------+----*----+---- TACTGTCAAAAGACTGTAGAGTAGAATAAGGAGAG
Flanking genome sequence (105810 - 105859)	----+--------+--------+--------+--------+----* AAAAAAAAAAAAAGACCTTGCTAGGGCACTGGGAGAGCTTAGCCCTGGTG

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	14	f	64277555	64283363	2	99.3	Perfect prediction

Gene/Protein Characteristic Table for KIAA0599

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information