HUGE

Gene/Protein Characteristic Table for KIAA1026

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK00716
Accession No. :	AB028949
Description :	kazrin isoform A.
HUGO Gene Name :
Clone Name :	fh00114 [Vector Info]
Flexi ORF Clone :	pF1KSDA1026
Source :	Human fetal brain

Features of the cloned DNA sequence	Description

Length: 5592 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 4032 bp

Genome contig ID gi89161185f_14697865
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
AGTTTTTAAATTGCATTGCCGTTTCTTTCTTTATG
Flanking genome sequence
(567780 - 567829)
----+----*----+----*----+----*----+----*----+----*
AAAAAAAAGAAAAAAAGAAAATTGTTTCATTTAATTTATTTGCACAAATG

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 1 f 14797787 15265643 7 99.4 Perfect prediction

Features of the protein sequence	Description

Length: 519 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAG09940	1.1e-125	100.0	kazrin protein ...	synthetic construct
AAS86434	3.6e-100	97.3	kazrin isoform ...	Homo sapiens
Q674X7	5.5e-100	97.3	Kazrin.	Homo sapiens
Q5FWS6	5e-94	92.2	Kazrin.	Rattus norvegicus
NP_001103154	1.6e-93	92.2	kazrin isoform ...	Mus musculus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: GCCCCATCAATAAGCCATCTG

Primer_r
: ATAGGGTTGTGCAGGTTCTTC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 1

Experimental conditions

Panel name	: UniGene
Primer_f	: -
Primer_r	: -
PCR product length	: -
PCR conditions	: -

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	4032 bp
Genome contig ID	gi89161185f_14697865
PolyA signal sequence (None)	+--------+--------+----*----+---- AGTTTTTAAATTGCATTGCCGTTTCTTTCTTTATG
Flanking genome sequence (567780 - 567829)	----+--------+--------+--------+--------+----* AAAAAAAAGAAAAAAAGAAAATTGTTTCATTTAATTTATTTGCACAAATG

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	1	f	14797787	15265643	7	99.4	Perfect prediction

Primer_f	: GCCCCATCAATAAGCCATCTG
Primer_r	: ATAGGGTTGTGCAGGTTCTTC
PCR conditions	: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

Gene/Protein Characteristic Table for KIAA1026

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information