HUGE

Gene/Protein Characteristic Table for KIAA1033

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK01144
Accession No. :	AB028956
Description :
HUGO Gene Name :
Clone Name :	fh00728 [Vector Info]
Flexi ORF Clone :	pF1KA1033
Source :	Human fetal brain

Features of the cloned DNA sequence	Description

Length: 5112 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 1521 bp

Genome contig ID gi89161190f_103925640
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
TAATTTATATTTTCATTATTATAAGTGTTTATATT
Flanking genome sequence
(160722 - 160771)
----+----*----+----*----+----*----+----*----+----*
AATGATCTTGCATTTGATTATATCAAATTCGTCATTTCATAGCAACAGTA

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 12 f 104025640 104086360 33 99.7 Perfect prediction

Features of the protein sequence	Description

Length: 1196 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
NP_056090	99.9	hypothetical pr...	Homo sapiens
XP_531762	97.7	similar to CG13...	Canis lupus fam...
EDL21392	96.4	mCG3365, isofor...	Mus musculus
XP_235003	95.7	similar to CG13...	Rattus norvegicus
BAE26179	97.0	unnamed protein...	Mus musculus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

Motif_DB interpro_ID From To Entry Definition

None - - - - -

Motif_DB	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

- - - - - - -

Method	No.	N terminal	transmembrane region	C terminal	type	length
-	-	-	-	-	-	-

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: CCATAGAGTCCTGTTTGAAGC

Primer_r
: AAGTCTACCCAAACCATCACC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 12

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: CCATAGAGTCCTGTTTGAAGC
Primer_r	: AAGTCTACCCAAACCATCACC
PCR product length	: 154 bp
PCR conditions	: 95 °C15 sec62 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	1521 bp
Genome contig ID	gi89161190f_103925640
PolyA signal sequence (None)	+--------+--------+----*----+---- TAATTTATATTTTCATTATTATAAGTGTTTATATT
Flanking genome sequence (160722 - 160771)	----+--------+--------+--------+--------+----* AATGATCTTGCATTTGATTATATCAAATTCGTCATTTCATAGCAACAGTA

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	12	f	104025640	104086360	33	99.7	Perfect prediction

Gene/Protein Characteristic Table for KIAA1033

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information