HUGE

Gene/Protein Characteristic Table for KIAA1530

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Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :
Accession No. :	AB040963
Description :
HUGO Gene Name :
Clone Name :	hj05130 [Vector Info]
Source :	Human adult brain

Features of the cloned DNA sequence	Description

Length: 4672 bp
Physical map
Restriction map
The cloned DNA sequence was revised by direct RT-PCR/sequencing experiments following the alert of coding interruption by GeneMark analysis.
Comparison between the cloned and the revised DNA sequences.
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. revised DNA seq.
Warning for N-terminal truncation:
NO NO

Warning for coding interruption:
YES NO

Features of the protein sequence	Description

Length: 794 aa
This protein sequence is predicted from the revised DNA sequence

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
NP_065945	0	99.9	hypothetical pr...	Homo sapiens
XP_001082560	0	93.5	similar to ZK74...	Macaca mulatta
EDL37418	4e-179	71.7	mCG2528, isofor...	Mus musculus
AAI44921	5.2e-179	71.7	4933407H18Rik p...	Mus musculus
XP_545930	5.5e-179	69.1	similar to ZK74...	Canis lupus fam...

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

None - - - - -

Search method	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

SOSUI2 1 61 FIGLRISWLLLASAALLEAALRN 83 PRIMARY 23

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	61	FIGLRISWLLLASAALLEAALRN	83	PRIMARY	23

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: GAAATGGTGTGTTGCAATGCC

Primer_r
: GTGTTCACATCTCCAGGCCCG

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 4

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: GAAATGGTGTGTTGCAATGCC
Primer_r	: GTGTTCACATCTCCAGGCCCG
PCR product length	: 118 bp
PCR conditions	: 95 °C15 sec64 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.	revised DNA seq.
Warning for N-terminal truncation:	NO	NO
Warning for coding interruption:	YES	NO

Gene/Protein Characteristic Table for KIAA1530

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information