(Linear) (Six-base) MAPSORT of: KIAA0399.seq Check: 9464 from: 1 to: 8883 KIAA0399.orf With 182 enzymes: SgfI * February 28, 2007 11:20 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 936 6141 6557 8883 Size: 936 5205 416 2326 Fragments arranged by size: 5205 2326 936 416 AatII G_ACGT'C Cuts at: 0 4679 8883 Size: 4679 4204 AccI GT'mk_AC Cuts at: 0 6455 8883 Size: 6455 2428 Acc65I G'GTAC_C Cuts at: 0 2102 8883 Size: 2102 6781 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 427 676 967 1579 1805 1867 2194 2956 Size: 427 249 291 612 226 62 327 762 Cuts at: 2956 3214 3744 4451 4559 4690 4795 6191 6730 Size: 258 530 707 108 131 105 1396 539 Cuts at: 6730 7111 7162 8256 8883 Size: 381 51 1094 627 Fragments arranged by size: 1396 1094 762 707 627 612 539 530 427 381 327 291 258 249 226 131 108 105 62 51 AfeI AGC'GCT Cuts at: 0 128 2071 8883 Size: 128 1943 6812 Fragments arranged by size: 6812 1943 128 AflIII A'CryG_T Cuts at: 0 404 629 4520 5300 8883 Size: 404 225 3891 780 3583 Fragments arranged by size: 3891 3583 780 404 225 AgeI A'CCGG_T Cuts at: 0 5931 8883 Size: 5931 2952 AleI CACnn'nnGTG Cuts at: 0 23 2502 2504 4715 8883 Size: 23 2479 2 2211 4168 Fragments arranged by size: 4168 2479 2211 23 2 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 1529 4272 6257 7751 8834 8883 Size: 1529 2743 1985 1494 1083 49 Fragments arranged by size: 2743 1985 1529 1494 1083 49 AlwNI CAG_nnn'CTG Cuts at: 0 848 916 958 1557 2676 3003 3895 6169 Size: 848 68 42 599 1119 327 892 2274 Cuts at: 6169 7698 8808 8883 Size: 1529 1110 75 Fragments arranged by size: 2274 1529 1119 1110 892 848 599 327 75 68 42 ApaI G_GGCC'C Cuts at: 0 67 2856 6310 6951 8883 Size: 67 2789 3454 641 1932 Fragments arranged by size: 3454 2789 1932 641 67 ApaLI G'TGCA_C Cuts at: 0 633 1000 1479 2147 2700 8883 Size: 633 367 479 668 553 6183 Fragments arranged by size: 6183 668 633 553 479 367 ApoI r'AATT_y Cuts at: 0 423 1115 1828 2316 3370 3415 3559 4285 Size: 423 692 713 488 1054 45 144 726 Cuts at: 4285 4928 5205 6119 7211 8185 8477 8883 Size: 643 277 914 1092 974 292 406 Fragments arranged by size: 1092 1054 974 914 726 713 692 643 488 423 406 292 277 144 45 AvaI C'yCGr_G Cuts at: 0 90 108 2343 2822 4586 5907 6944 7027 Size: 90 18 2235 479 1764 1321 1037 83 Cuts at: 7027 8883 Size: 1856 Fragments arranged by size: 2235 1856 1764 1321 1037 479 90 83 18 AvrII C'CTAG_G Cuts at: 0 5430 8883 Size: 5430 3453 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 0 5373 5406 8883 Size: 5373 33 3477 Fragments arranged by size: 5373 3477 33 BamHI G'GATC_C Cuts at: 0 2721 6099 8883 Size: 2721 3378 2784 Fragments arranged by size: 3378 2784 2721 BanI G'GyrC_C Cuts at: 0 322 896 1783 2102 4474 4638 8164 8883 Size: 322 574 887 319 2372 164 3526 719 Fragments arranged by size: 3526 2372 887 719 574 322 319 164 BanII G_rGCy'C Cuts at: 0 67 1474 1892 2856 2872 4547 5914 6310 Size: 67 1407 418 964 16 1675 1367 396 Cuts at: 6310 6951 7385 7523 7928 8705 8883 Size: 641 434 138 405 777 178 Fragments arranged by size: 1675 1407 1367 964 777 641 434 418 405 396 178 138 67 16 BbeI G_GCGC'C Cuts at: 0 326 8883 Size: 326 8557 BbsI GAAGACnn'nnnn_ Cuts at: 0 35 638 3750 4264 6406 8883 Size: 35 603 3112 514 2142 2477 Fragments arranged by size: 3112 2477 2142 603 514 35 BbvCI CC'TCA_GC Cuts at: 0 374 8883 Size: 374 8509 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 559 593 5805 5839 8707 8741 8883 Size: 559 34 5212 34 2868 34 142 Fragments arranged by size: 5212 2868 559 142 34 34 34 BciVI GTATCCnnnnn_n' Cuts at: 0 3339 7532 7605 8883 Size: 3339 4193 73 1278 Fragments arranged by size: 4193 3339 1278 73 BclI T'GATC_A Cuts at: 0 3999 5159 5513 6467 6818 8883 Size: 3999 1160 354 954 351 2065 Fragments arranged by size: 3999 2065 1160 954 354 351 BglI GCCn_nnn'nGGC Cuts at: 0 162 5737 6590 8516 8613 8883 Size: 162 5575 853 1926 97 270 Fragments arranged by size: 5575 1926 853 270 162 97 BglII A'GATC_T Cuts at: 0 705 2306 2961 5109 8883 Size: 705 1601 655 2148 3774 Fragments arranged by size: 3774 2148 1601 705 655 BlpI GC'TnA_GC Cuts at: 0 454 5993 6955 7262 7553 8883 Size: 454 5539 962 307 291 1330 Fragments arranged by size: 5539 1330 962 454 307 291 Bme1580I G_kGCm'C Cuts at: 0 67 97 637 1004 1483 1788 2151 2543 Size: 67 30 540 367 479 305 363 392 Cuts at: 2543 2704 2856 4477 4643 5945 6310 6645 6951 Size: 161 152 1621 166 1302 365 335 306 Cuts at: 6951 8694 8730 8883 Size: 1743 36 153 Fragments arranged by size: 1743 1621 1302 540 479 392 367 365 363 335 306 305 166 161 153 152 67 36 30 BmgBI CAC'GTC Cuts at: 0 1771 4521 6339 8655 8883 Size: 1771 2750 1818 2316 228 Fragments arranged by size: 2750 2316 1818 1771 228 BmrI ACTGGGnnnn_n' Cuts at: 0 87 357 1782 3651 3879 6609 7562 8883 Size: 87 270 1425 1869 228 2730 953 1321 Fragments arranged by size: 2730 1869 1425 1321 953 270 228 87 BmtI G_CTAG'C Cuts at: 0 6146 8883 Size: 6146 2737 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 2886 4612 8883 Size: 2886 1726 4271 Fragments arranged by size: 4271 2886 1726 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 107 172 310 331 570 634 722 1567 Size: 107 65 138 21 239 64 88 845 Cuts at: 1567 2374 2972 4028 4342 6352 7510 7689 7942 Size: 807 598 1056 314 2010 1158 179 253 Cuts at: 7942 8002 8883 Size: 60 881 Fragments arranged by size: 2010 1158 1056 881 845 807 598 314 253 239 179 138 107 88 65 64 60 21 Bpu10I CC'TnA_GC Cuts at: 0 374 892 1891 3733 6230 8883 Size: 374 518 999 1842 2497 2653 Fragments arranged by size: 2653 2497 1842 999 518 374 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 403 721 3183 3655 7387 8883 Size: 403 318 2462 472 3732 1496 Fragments arranged by size: 3732 2462 1496 472 403 318 BsaI GGTCTCn'nnnn_ Cuts at: 0 93 1129 1170 1205 3238 4448 7265 8285 Size: 93 1036 41 35 2033 1210 2817 1020 Cuts at: 8285 8883 Size: 598 Fragments arranged by size: 2817 2033 1210 1036 1020 598 93 41 35 BsaAI yAC'GTr Cuts at: 0 2705 3281 7863 7899 8883 Size: 2705 576 4582 36 984 Fragments arranged by size: 4582 2705 984 576 36 BsaBI GATnn'nnATC Cuts at: 0 2773 8883 Size: 2773 6110 BsaHI Gr'CG_yC Cuts at: 0 113 323 1540 3645 4676 6458 8883 Size: 113 210 1217 2105 1031 1782 2425 Fragments arranged by size: 2425 2105 1782 1217 1031 210 113 BsaWI w'CCGG_w Cuts at: 0 1720 3818 5931 5947 8883 Size: 1720 2098 2113 16 2936 Fragments arranged by size: 2936 2113 2098 1720 16 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 2522 2552 5096 5126 8883 Size: 2522 30 2544 30 3757 Fragments arranged by size: 3757 2544 2522 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 364 1552 2185 2188 2452 3613 4639 5104 Size: 364 1188 633 3 264 1161 1026 465 Cuts at: 5104 5974 6935 7186 7224 8092 8224 8883 Size: 870 961 251 38 868 132 659 Fragments arranged by size: 1188 1161 1026 961 870 868 659 633 465 364 264 251 132 38 3 BseYI C'CCAG_C Cuts at: 0 59 261 1009 4478 5063 5883 6950 6968 Size: 59 202 748 3469 585 820 1067 18 Cuts at: 6968 8040 8883 Size: 1072 843 Fragments arranged by size: 3469 1072 1067 843 820 748 585 202 59 18 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 553 1249 2031 2263 3117 4814 5418 5765 Size: 553 696 782 232 854 1697 604 347 Cuts at: 5765 7182 7417 7634 7756 8883 Size: 1417 235 217 122 1127 Fragments arranged by size: 1697 1417 1127 854 782 696 604 553 347 235 232 217 122 BsiEI CG_ry'CG Cuts at: 0 8387 8883 Size: 8387 496 BsiHKAI G_wGCw'C Cuts at: 0 620 637 1004 1474 1483 1892 2151 2666 Size: 620 17 367 470 9 409 259 515 Cuts at: 2666 2704 2944 3161 6338 6610 7268 7523 7928 Size: 38 240 217 3177 272 658 255 405 Cuts at: 7928 8018 8705 8883 Size: 90 687 178 Fragments arranged by size: 3177 687 658 620 515 470 409 405 367 272 259 255 240 217 178 90 38 17 9 BsmI GAATG_Cn' Cuts at: 0 975 2359 8883 Size: 975 1384 6524 Fragments arranged by size: 6524 1384 975 BsmBI CGTCTCn'nnnn_ Cuts at: 0 2364 2814 3633 5453 8883 Size: 2364 450 819 1820 3430 Fragments arranged by size: 3430 2364 1820 819 450 Bsp1286I G_dGCh'C Cuts at: 0 67 97 620 637 1004 1474 1483 1788 Size: 67 30 523 17 367 470 9 305 Cuts at: 1788 1892 2151 2543 2666 2704 2856 2872 2944 Size: 104 259 392 123 38 152 16 72 Cuts at: 2944 3161 4477 4547 4643 5914 5945 6310 6338 Size: 217 1316 70 96 1271 31 365 28 Cuts at: 6338 6610 6645 6951 7268 7385 7523 7928 8018 Size: 272 35 306 317 117 138 405 90 Cuts at: 8018 8694 8705 8730 8883 Size: 676 11 25 153 Fragments arranged by size: 1316 1271 676 523 470 405 392 367 365 317 306 305 272 259 217 153 152 138 123 117 104 96 90 72 70 67 38 35 31 30 28 25 17 16 11 9 BspHI T'CATG_A Cuts at: 0 1466 5117 6030 7410 8883 Size: 1466 3651 913 1380 1473 Fragments arranged by size: 3651 1473 1466 1380 913 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 936 1565 2936 4870 6141 6557 8765 8883 Size: 936 629 1371 1934 1271 416 2208 118 Fragments arranged by size: 2208 1934 1371 1271 936 629 416 118 BsrBI CCG'CTC Cuts at: 0 258 8883 Size: 258 8625 BsrDI GCAATG_nn' Cuts at: 0 905 1020 5306 5544 6018 6662 8816 8883 Size: 905 115 4286 238 474 644 2154 67 Fragments arranged by size: 4286 2154 905 644 474 238 115 67 BsrFI r'CCGG_y Cuts at: 0 46 156 325 3499 4571 5657 5931 8883 Size: 46 110 169 3174 1072 1086 274 2952 Fragments arranged by size: 3174 2952 1086 1072 274 169 110 46 BsrGI T'GTAC_A Cuts at: 0 2492 8883 Size: 2492 6391 BssSI C'ACGA_G Cuts at: 0 6736 8883 Size: 6736 2147 BstAPI GCAn_nnn'nTGC Cuts at: 0 916 2676 4444 5423 5543 8013 8883 Size: 916 1760 1768 979 120 2470 870 Fragments arranged by size: 2470 1768 1760 979 916 870 120 BstBI TT'CG_AA Cuts at: 0 4143 8883 Size: 4143 4740 BstEII G'GTnAC_C Cuts at: 0 5637 8883 Size: 5637 3246 BstXI CCAn_nnnn'nTGG Cuts at: 0 912 4465 6533 7608 8055 8737 8832 8883 Size: 912 3553 2068 1075 447 682 95 51 Fragments arranged by size: 3553 2068 1075 912 682 447 95 51 BstYI r'GATC_y Cuts at: 0 705 1318 2306 2721 2961 5109 5274 5409 Size: 705 613 988 415 240 2148 165 135 Cuts at: 5409 6099 6620 7109 8000 8883 Size: 690 521 489 891 883 Fragments arranged by size: 2148 988 891 883 705 690 613 521 489 415 240 165 135 Bsu36I CC'TnA_GG Cuts at: 0 2200 3710 4738 5447 8883 Size: 2200 1510 1028 709 3436 Fragments arranged by size: 3436 2200 1510 1028 709 BtgI C'CryG_G Cuts at: 0 83 140 267 1535 1657 2543 2969 4295 Size: 83 57 127 1268 122 886 426 1326 Cuts at: 4295 4619 5454 6311 6611 8048 8771 8883 Size: 324 835 857 300 1437 723 112 Fragments arranged by size: 1437 1326 1268 886 857 835 723 426 324 300 127 122 112 83 57 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 211 1112 5561 8577 8883 Size: 211 901 4449 3016 306 Fragments arranged by size: 4449 3016 901 306 211 BtsI GCAGTG_nn' Cuts at: 0 30 618 849 917 2151 3150 3569 4506 Size: 30 588 231 68 1234 999 419 937 Cuts at: 4506 4815 5401 5499 5796 6470 6681 7667 8250 Size: 309 586 98 297 674 211 986 583 Cuts at: 8250 8883 Size: 633 Fragments arranged by size: 1234 999 986 937 674 633 588 586 583 419 309 297 231 211 98 68 30 ClaI AT'CG_AT Cuts at: 0 5379 8883 Size: 5379 3504 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 4373 4408 8883 Size: 4373 35 4475 Fragments arranged by size: 4475 4373 35 DraI TTT'AAA Cuts at: 0 869 8883 Size: 869 8014 DraIII CAC_nnn'GTG Cuts at: 0 3156 7657 8360 8883 Size: 3156 4501 703 523 Fragments arranged by size: 4501 3156 703 523 DrdI GACnn_nn'nnGTC Cuts at: 0 2806 8883 Size: 2806 6077 EaeI y'GGCC_r Cuts at: 0 158 2762 5598 5738 6420 7318 8384 8517 Size: 158 2604 2836 140 682 898 1066 133 Cuts at: 8517 8571 8834 8883 Size: 54 263 49 Fragments arranged by size: 2836 2604 1066 898 682 263 158 140 133 54 49 EagI C'GGCC_G Cuts at: 0 8384 8883 Size: 8384 499 EarI CTCTTCn'nnn_ Cuts at: 0 248 269 1430 1598 2638 2884 2932 4100 Size: 248 21 1161 168 1040 246 48 1168 Cuts at: 4100 4261 4394 4535 6253 6874 7301 7495 7825 Size: 161 133 141 1718 621 427 194 330 Cuts at: 7825 8710 8883 Size: 885 173 Fragments arranged by size: 1718 1168 1161 1040 885 621 427 330 248 246 194 173 168 161 141 133 48 21 EcoICRI GAG'CTC Cuts at: 0 1472 1890 7521 7926 8703 8883 Size: 1472 418 5631 405 777 180 Fragments arranged by size: 5631 1472 777 418 405 180 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 107 172 310 331 427 570 634 676 Size: 107 65 138 21 96 143 64 42 Cuts at: 676 722 967 1567 1579 1805 1867 2194 2374 Size: 46 245 600 12 226 62 327 180 Cuts at: 2374 2956 2972 3214 3744 4028 4342 4451 4559 Size: 582 16 242 530 284 314 109 108 Cuts at: 4559 4690 4795 6191 6352 6730 7111 7162 7510 Size: 131 105 1396 161 378 381 51 348 Cuts at: 7510 7689 7942 8002 8256 8883 Size: 179 253 60 254 627 Fragments arranged by size: 1396 627 600 582 530 381 378 348 327 314 284 254 253 245 242 226 180 179 161 143 138 131 109 108 107 105 96 65 64 62 60 51 46 42 21 16 12 EcoNI CCTnn'n_nnAGG Cuts at: 0 1939 4448 7774 8647 8883 Size: 1939 2509 3326 873 236 Fragments arranged by size: 3326 2509 1939 873 236 EcoO109I rG'GnC_Cy Cuts at: 0 63 414 531 2204 2852 2853 3963 5003 Size: 63 351 117 1673 648 1 1110 1040 Cuts at: 5003 5925 6307 6759 7050 7203 7371 8883 Size: 922 382 452 291 153 168 1512 Fragments arranged by size: 1673 1512 1110 1040 922 648 452 382 351 291 168 153 117 63 1 EcoRI G'AATT_C Cuts at: 0 423 1115 3370 5205 8883 Size: 423 692 2255 1835 3678 Fragments arranged by size: 3678 2255 1835 692 423 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 5203 8883 Size: 5203 3680 HaeII r_GCGC'y Cuts at: 0 130 148 326 1285 2073 3670 5732 7601 Size: 130 18 178 959 788 1597 2062 1869 Cuts at: 7601 7749 7763 8883 Size: 148 14 1120 Fragments arranged by size: 2062 1869 1597 1120 959 788 178 148 130 18 14 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 529 561 1504 1536 2518 2550 4534 4566 Size: 529 32 943 32 982 32 1984 32 Cuts at: 4566 5832 5864 5890 5922 8505 8537 8883 Size: 1266 32 26 32 2583 32 346 Fragments arranged by size: 2583 1984 1266 982 943 529 346 32 32 32 32 32 32 32 26 HincII GTy'rAC Cuts at: 0 1589 3106 4077 5478 8883 Size: 1589 1517 971 1401 3405 Fragments arranged by size: 3405 1589 1517 1401 971 HindIII A'AGCT_T Cuts at: 0 1879 8883 Size: 1879 7004 KasI G'GCGC_C Cuts at: 0 322 8883 Size: 322 8561 KpnI G_GTAC'C Cuts at: 0 2106 8883 Size: 2106 6777 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 389 803 3415 3764 4310 4829 8366 8883 Size: 389 414 2612 349 546 519 3537 517 Fragments arranged by size: 3537 2612 546 519 517 414 389 349 MscI TGG'CCA Cuts at: 0 2764 5740 8519 8836 8883 Size: 2764 2976 2779 317 47 Fragments arranged by size: 2976 2779 2764 317 47 MslI CAynn'nnrTG Cuts at: 0 23 910 2502 2504 2641 3305 4715 5122 Size: 23 887 1592 2 137 664 1410 407 Cuts at: 5122 5153 6386 8883 Size: 31 1233 2497 Fragments arranged by size: 2497 1592 1410 1233 887 664 407 137 31 23 2 MspA1I CmG'CkG Cuts at: 0 43 85 142 269 675 2934 4537 5387 Size: 43 42 57 127 406 2259 1603 850 Cuts at: 5387 6696 6708 6779 6906 6954 7557 7843 7974 Size: 1309 12 71 127 48 603 286 131 Cuts at: 7974 8276 8792 8883 Size: 302 516 91 Fragments arranged by size: 2259 1603 1309 850 603 516 406 302 286 131 127 127 91 71 57 48 43 42 12 NaeI GCC'GGC Cuts at: 0 158 327 4573 8883 Size: 158 169 4246 4310 Fragments arranged by size: 4310 4246 169 158 NarI GG'CG_CC Cuts at: 0 323 8883 Size: 323 8560 NcoI C'CATG_G Cuts at: 0 1535 2543 4619 6611 8048 8883 Size: 1535 1008 2076 1992 1437 835 Fragments arranged by size: 2076 1992 1535 1437 1008 835 NdeI CA'TA_TG Cuts at: 0 7943 8883 Size: 7943 940 NgoMIV G'CCGG_C Cuts at: 0 156 325 4571 8883 Size: 156 169 4246 4312 Fragments arranged by size: 4312 4246 169 156 NheI G'CTAG_C Cuts at: 0 6142 8883 Size: 6142 2741 NspI r_CATG'y Cuts at: 0 408 633 939 1296 1604 3953 5241 5304 Size: 408 225 306 357 308 2349 1288 63 Cuts at: 5304 5820 8040 8066 8883 Size: 516 2220 26 817 Fragments arranged by size: 2349 2220 1288 817 516 408 357 308 306 225 63 26 PasI CC'CwG_GG Cuts at: 0 2857 3346 6408 8883 Size: 2857 489 3062 2475 Fragments arranged by size: 3062 2857 2475 489 PciI A'CATG_T Cuts at: 0 404 629 5300 8883 Size: 404 225 4671 3583 Fragments arranged by size: 4671 3583 404 225 PflMI CCAn_nnn'nTGG Cuts at: 0 2238 3003 3663 5472 5634 8073 8883 Size: 2238 765 660 1809 162 2439 810 Fragments arranged by size: 2439 2238 1809 810 765 660 162 PfoI T'CCnGG_A Cuts at: 0 299 4763 7199 7487 7808 7919 8310 8883 Size: 299 4464 2436 288 321 111 391 573 Fragments arranged by size: 4464 2436 573 391 321 299 288 111 PmlI CAC'GTG Cuts at: 0 7863 7899 8883 Size: 7863 36 984 Fragments arranged by size: 7863 984 36 PpuMI rG'GwC_Cy Cuts at: 0 2204 5003 6759 7050 7203 8883 Size: 2204 2799 1756 291 153 1680 Fragments arranged by size: 2799 2204 1756 1680 291 153 PshAI GACnn'nnGTC Cuts at: 0 3536 4460 8883 Size: 3536 924 4423 Fragments arranged by size: 4423 3536 924 PspOMI G'GGCC_C Cuts at: 0 63 2852 6306 6947 8883 Size: 63 2789 3454 641 1936 Fragments arranged by size: 3454 2789 1936 641 63 PspXI vC'TCGA_Gb Cuts at: 0 5907 8883 Size: 5907 2976 PstI C_TGCA'G Cuts at: 0 183 2158 2384 2414 2681 2933 4518 5396 Size: 183 1975 226 30 267 252 1585 878 Cuts at: 5396 6138 6507 7463 7727 8009 8750 8813 8883 Size: 742 369 956 264 282 741 63 70 Fragments arranged by size: 1975 1585 956 878 742 741 369 282 267 264 252 226 183 70 63 30 PvuII CAG'CTG Cuts at: 0 43 675 2934 4537 6696 6708 6906 6954 Size: 43 632 2259 1603 2159 12 198 48 Cuts at: 6954 7843 7974 8883 Size: 889 131 909 Fragments arranged by size: 2259 2159 1603 909 889 632 198 131 48 43 12 SacI G_AGCT'C Cuts at: 0 1474 1892 7523 7928 8705 8883 Size: 1474 418 5631 405 777 178 Fragments arranged by size: 5631 1474 777 418 405 178 SacII CC_GC'GG Cuts at: 0 86 143 270 8883 Size: 86 57 127 8613 Fragments arranged by size: 8613 127 86 57 SapI GCTCTTCn'nnn_ Cuts at: 0 248 2884 2932 4394 4535 8710 8883 Size: 248 2636 48 1462 141 4175 173 Fragments arranged by size: 4175 2636 1462 248 173 141 48 ScaI AGT'ACT Cuts at: 0 6964 8883 Size: 6964 1919 SexAI A'CCwGG_T Cuts at: 0 2237 8883 Size: 2237 6646 SfcI C'TryA_G Cuts at: 0 179 475 959 1322 2154 2380 2410 2677 Size: 179 296 484 363 832 226 30 267 Cuts at: 2677 2929 3204 4514 5392 5724 6047 6134 6152 Size: 252 275 1310 878 332 323 87 18 Cuts at: 6152 6503 7459 7723 8005 8367 8746 8809 8883 Size: 351 956 264 282 362 379 63 74 Fragments arranged by size: 1310 956 878 832 484 379 363 362 351 332 323 296 282 275 267 264 252 226 179 87 74 63 30 18 SfoI GGC'GCC Cuts at: 0 324 8883 Size: 324 8559 SmaI CCC'GGG Cuts at: 0 110 8883 Size: 110 8773 SmlI C'TyrA_G Cuts at: 0 418 736 2822 3162 3670 5907 7366 8883 Size: 418 318 2086 340 508 2237 1459 1517 Fragments arranged by size: 2237 2086 1517 1459 508 418 340 318 SphI G_CATG'C Cuts at: 0 5820 8066 8883 Size: 5820 2246 817 Fragments arranged by size: 5820 2246 817 SrfI GCCC'GGGC Cuts at: 0 110 8883 Size: 110 8773 SspI AAT'ATT Cuts at: 0 2026 8883 Size: 2026 6857 StuI AGG'CCT Cuts at: 0 355 481 5248 5864 8883 Size: 355 126 4767 616 3019 Fragments arranged by size: 4767 3019 616 355 126 StyI C'CwwG_G Cuts at: 0 1535 1935 2483 2543 2901 4127 4619 4803 Size: 1535 400 548 60 358 1226 492 184 Cuts at: 4803 5430 6611 8048 8883 Size: 627 1181 1437 835 Fragments arranged by size: 1535 1437 1226 1181 835 627 548 492 400 358 184 60 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 3827 4492 4578 5342 5645 5875 6559 7147 Size: 3827 665 86 764 303 230 684 588 Cuts at: 7147 7313 7489 8276 8485 8883 Size: 166 176 787 209 398 Fragments arranged by size: 3827 787 764 684 665 588 398 303 230 209 176 166 86 TatI w'GTAC_w Cuts at: 0 2421 2492 3044 6962 7229 8883 Size: 2421 71 552 3918 267 1654 Fragments arranged by size: 3918 2421 1654 552 267 71 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 2522 2554 2656 2688 6589 6621 8078 8110 Size: 2522 32 102 32 3901 32 1457 32 Cuts at: 8110 8883 Size: 773 Fragments arranged by size: 3901 2522 1457 773 102 32 32 32 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 74 2028 8883 Size: 74 1954 6855 Fragments arranged by size: 6855 1954 74 XhoI C'TCGA_G Cuts at: 0 2822 5907 8883 Size: 2822 3085 2976 Fragments arranged by size: 3085 2976 2822 XmaI C'CCGG_G Cuts at: 0 108 8883 Size: 108 8775 ZraI GAC'GTC Cuts at: 0 4677 8883 Size: 4677 4206 Enzymes that do cut: AarI AatII AccI Acc65I AcuI AfeI AflIII AgeI AleI AlfI AlwNI ApaI ApaLI ApoI AvaI AvrII BaeI BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssSI BstAPI BstBI BstEII BstXI BstYI Bsu36I BtgI BtgZI BtsI ClaI CspCI DraI DraIII DrdI EaeI EagI EarI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI HaeII Hin4I HincII HindIII KasI KpnI MmeI MscI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV NheI NspI PasI PciI PflMI PfoI PmlI PpuMI PshAI PspOMI PspXI PstI PvuII SacI SacII SapI ScaI SexAI SfcI SfoI SmaI SmlI SphI SrfI SspI StuI StyI TaqII TatI TstI XcmI XhoI XmaI ZraI Enzymes that do not cut: AclI AflII AhdI AloI AscI AseI AsiSI BfrBI BsiWI BspEI BssHII BstZ17I EciI EcoRV FseI FspI FspAI HpaI MfeI MluI NotI NruI NsiI PacI PmeI PpiI PsiI PsrI PvuI RsrII SalI SanDI SbfI SfiI SgfI SgrAI SnaBI SpeI SwaI Tth111I XbaI XmnI