(Linear) (Six-base) MAPSORT of: KIAA0672.seq Check: 267 from: 1 to: 2454 KIAA0672.orf With 182 enzymes: SgfI * October 24, 2006 15:07 .. AccI GT'mk_AC Cuts at: 0 2311 2362 2454 Size: 2311 51 92 Fragments arranged by size: 2311 92 51 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 73 470 916 1063 2454 Size: 73 397 446 147 1391 Fragments arranged by size: 1391 446 397 147 73 AfeI AGC'GCT Cuts at: 0 193 2454 Size: 193 2261 AflIII A'CryG_T Cuts at: 0 1383 2454 Size: 1383 1071 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1295 1327 1333 1365 2454 Size: 1295 32 6 32 1089 Fragments arranged by size: 1295 1089 32 32 6 AlwNI CAG_nnn'CTG Cuts at: 0 184 231 324 1692 1795 2410 2454 Size: 184 47 93 1368 103 615 44 Fragments arranged by size: 1368 615 184 103 93 47 44 ApaI G_GGCC'C Cuts at: 0 1751 2454 Size: 1751 703 ApoI r'AATT_y Cuts at: 0 1147 2454 Size: 1147 1307 AvaI C'yCGr_G Cuts at: 0 1453 1750 2103 2356 2454 Size: 1453 297 353 253 98 Fragments arranged by size: 1453 353 297 253 98 BamHI G'GATC_C Cuts at: 0 1040 2454 Size: 1040 1414 BanI G'GyrC_C Cuts at: 0 517 1445 1879 1953 2454 Size: 517 928 434 74 501 Fragments arranged by size: 928 517 501 434 74 BanII G_rGCy'C Cuts at: 0 368 1751 1860 1872 2357 2454 Size: 368 1383 109 12 485 97 Fragments arranged by size: 1383 485 368 109 97 12 BbeI G_GCGC'C Cuts at: 0 1449 1883 2454 Size: 1449 434 571 Fragments arranged by size: 1449 571 434 BbsI GAAGACnn'nnnn_ Cuts at: 0 86 476 2454 Size: 86 390 1978 Fragments arranged by size: 1978 390 86 BbvCI CC'TCA_GC Cuts at: 0 1474 2222 2454 Size: 1474 748 232 Fragments arranged by size: 1474 748 232 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 32 1639 1673 2454 Size: 32 1607 34 781 Fragments arranged by size: 1607 781 34 32 BglI GCCn_nnn'nGGC Cuts at: 0 1654 2454 Size: 1654 800 BglII A'GATC_T Cuts at: 0 2316 2454 Size: 2316 138 BlpI GC'TnA_GC Cuts at: 0 1871 2454 Size: 1871 583 Bme1580I G_kGCm'C Cuts at: 0 1751 1831 2454 Size: 1751 80 623 Fragments arranged by size: 1751 623 80 BmgBI CAC'GTC Cuts at: 0 357 2454 Size: 357 2097 BmrI ACTGGGnnnn_n' Cuts at: 0 1190 1578 2020 2454 Size: 1190 388 442 434 Fragments arranged by size: 1190 442 434 388 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 2099 2225 2454 Size: 2099 126 229 Fragments arranged by size: 2099 229 126 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 127 790 1522 1723 1772 1803 1886 2404 Size: 127 663 732 201 49 31 83 518 Cuts at: 2404 2454 Size: 50 Fragments arranged by size: 732 663 518 201 127 83 50 49 31 Bpu10I CC'TnA_GC Cuts at: 0 317 1474 2189 2222 2454 Size: 317 1157 715 33 232 Fragments arranged by size: 1157 715 317 232 33 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 859 2454 Size: 859 1595 BsaI GGTCTCn'nnnn_ Cuts at: 0 2196 2454 Size: 2196 258 BsaAI yAC'GTr Cuts at: 0 1386 2454 Size: 1386 1068 BsaHI Gr'CG_yC Cuts at: 0 1446 1880 2454 Size: 1446 434 574 Fragments arranged by size: 1446 574 434 BsaWI w'CCGG_w Cuts at: 0 1931 2454 Size: 1931 523 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 178 208 1211 1241 1333 1363 2419 2449 Size: 178 30 1003 30 92 30 1056 30 Cuts at: 2449 2454 Size: 5 Fragments arranged by size: 1056 1003 178 92 30 30 30 30 5 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 787 871 1578 2120 2210 2443 2446 2454 Size: 787 84 707 542 90 233 3 8 Fragments arranged by size: 787 707 542 233 90 84 8 3 BseYI C'CCAG_C Cuts at: 0 1888 1894 2050 2118 2454 Size: 1888 6 156 68 336 Fragments arranged by size: 1888 336 156 68 6 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 958 1781 1859 2454 Size: 958 823 78 595 Fragments arranged by size: 958 823 595 78 BsiEI CG_ry'CG Cuts at: 0 795 1595 1599 2454 Size: 795 800 4 855 Fragments arranged by size: 855 800 795 4 BsiHKAI G_wGCw'C Cuts at: 0 779 1872 2357 2390 2446 2454 Size: 779 1093 485 33 56 8 Fragments arranged by size: 1093 779 485 56 33 8 BsmI GAATG_Cn' Cuts at: 0 1098 2454 Size: 1098 1356 BsmBI CGTCTCn'nnnn_ Cuts at: 0 292 347 2454 Size: 292 55 2107 Fragments arranged by size: 2107 292 55 Bsp1286I G_dGCh'C Cuts at: 0 368 779 1751 1831 1860 1872 2357 2390 Size: 368 411 972 80 29 12 485 33 Cuts at: 2390 2446 2454 Size: 56 8 Fragments arranged by size: 972 485 411 368 80 56 33 29 12 8 BspEI T'CCGG_A Cuts at: 0 1931 2454 Size: 1931 523 BsrFI r'CCGG_y Cuts at: 0 1442 1466 1594 2454 Size: 1442 24 128 860 Fragments arranged by size: 1442 860 128 24 BsrGI T'GTAC_A Cuts at: 0 602 2454 Size: 602 1852 BstXI CCAn_nnnn'nTGG Cuts at: 0 567 1203 2011 2454 Size: 567 636 808 443 Fragments arranged by size: 808 636 567 443 BstYI r'GATC_y Cuts at: 0 1040 2316 2454 Size: 1040 1276 138 Fragments arranged by size: 1276 1040 138 Bsu36I CC'TnA_GG Cuts at: 0 535 1525 2084 2454 Size: 535 990 559 370 Fragments arranged by size: 990 559 535 370 BtgI C'CryG_G Cuts at: 0 1484 1703 2264 2454 Size: 1484 219 561 190 Fragments arranged by size: 1484 561 219 190 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 1553 1588 2454 Size: 1553 35 866 Fragments arranged by size: 1553 866 35 DrdI GACnn_nn'nnGTC Cuts at: 0 480 1275 2454 Size: 480 795 1179 Fragments arranged by size: 1179 795 480 EaeI y'GGCC_r Cuts at: 0 32 614 792 1234 1592 1980 2013 2454 Size: 32 582 178 442 358 388 33 441 Fragments arranged by size: 582 442 441 388 358 178 33 32 EagI C'GGCC_G Cuts at: 0 792 1592 2454 Size: 792 800 862 Fragments arranged by size: 862 800 792 EarI CTCTTCn'nnn_ Cuts at: 0 545 871 1575 2454 Size: 545 326 704 879 Fragments arranged by size: 879 704 545 326 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 397 2359 2454 Size: 397 1962 95 Fragments arranged by size: 1962 397 95 EcoICRI GAG'CTC Cuts at: 0 1870 2355 2454 Size: 1870 485 99 Fragments arranged by size: 1870 485 99 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 73 127 470 790 916 1063 1522 1723 Size: 73 54 343 320 126 147 459 201 Cuts at: 1723 1772 1803 1886 2404 2454 Size: 49 31 83 518 50 Fragments arranged by size: 518 459 343 320 201 147 126 83 73 54 50 49 31 EcoNI CCTnn'n_nnAGG Cuts at: 0 88 2454 Size: 88 2366 EcoO109I rG'GnC_Cy Cuts at: 0 1219 1971 2271 2454 Size: 1219 752 300 183 Fragments arranged by size: 1219 752 300 183 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 103 771 1992 2454 Size: 103 668 1221 462 Fragments arranged by size: 1221 668 462 103 HaeII r_GCGC'y Cuts at: 0 195 1449 1883 2454 Size: 195 1254 434 571 Fragments arranged by size: 1254 571 434 195 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 178 210 574 606 1211 1243 2275 2307 Size: 178 32 364 32 605 32 1032 32 Cuts at: 2307 2323 2344 2355 2376 2419 2451 2454 Size: 16 21 11 21 43 32 3 Fragments arranged by size: 1032 605 364 178 43 32 32 32 32 32 21 21 16 11 3 HincII GTy'rAC Cuts at: 0 2363 2454 Size: 2363 91 HindIII A'AGCT_T Cuts at: 0 1075 2454 Size: 1075 1379 KasI G'GCGC_C Cuts at: 0 1445 1879 2454 Size: 1445 434 575 Fragments arranged by size: 1445 575 434 MfeI C'AATT_G Cuts at: 0 965 1208 2454 Size: 965 243 1246 Fragments arranged by size: 1246 965 243 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 1579 2454 Size: 1579 875 MscI TGG'CCA Cuts at: 0 34 616 1236 1982 2015 2454 Size: 34 582 620 746 33 439 Fragments arranged by size: 746 620 582 439 34 33 MslI CAynn'nnrTG Cuts at: 0 1546 2454 Size: 1546 908 MspA1I CmG'CkG Cuts at: 0 30 595 768 791 1677 1705 2011 2019 Size: 30 565 173 23 886 28 306 8 Cuts at: 2019 2122 2454 Size: 103 332 Fragments arranged by size: 886 565 332 306 173 103 30 28 23 8 NaeI GCC'GGC Cuts at: 0 1468 2454 Size: 1468 986 NarI GG'CG_CC Cuts at: 0 1446 1880 2454 Size: 1446 434 574 Fragments arranged by size: 1446 574 434 NgoMIV G'CCGG_C Cuts at: 0 1466 2454 Size: 1466 988 NspI r_CATG'y Cuts at: 0 24 158 1321 2292 2310 2394 2454 Size: 24 134 1163 971 18 84 60 Fragments arranged by size: 1163 971 134 84 60 24 18 PasI CC'CwG_GG Cuts at: 0 1336 2296 2454 Size: 1336 960 158 Fragments arranged by size: 1336 960 158 PflMI CCAn_nnn'nTGG Cuts at: 0 45 1542 2454 Size: 45 1497 912 Fragments arranged by size: 1497 912 45 PfoI T'CCnGG_A Cuts at: 0 1058 2454 Size: 1058 1396 PmlI CAC'GTG Cuts at: 0 1386 2454 Size: 1386 1068 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1333 1365 2454 Size: 1333 32 1089 Fragments arranged by size: 1333 1089 32 PpuMI rG'GwC_Cy Cuts at: 0 1219 1971 2454 Size: 1219 752 483 Fragments arranged by size: 1219 752 483 PshAI GACnn'nnGTC Cuts at: 0 1916 2454 Size: 1916 538 PspOMI G'GGCC_C Cuts at: 0 1747 2454 Size: 1747 707 PstI C_TGCA'G Cuts at: 0 164 1911 2127 2454 Size: 164 1747 216 327 Fragments arranged by size: 1747 327 216 164 PvuII CAG'CTG Cuts at: 0 30 595 2019 2122 2454 Size: 30 565 1424 103 332 Fragments arranged by size: 1424 565 332 103 30 SacI G_AGCT'C Cuts at: 0 1872 2357 2454 Size: 1872 485 97 Fragments arranged by size: 1872 485 97 SacII CC_GC'GG Cuts at: 0 1706 2454 Size: 1706 748 SalI G'TCGA_C Cuts at: 0 2361 2454 Size: 2361 93 ScaI AGT'ACT Cuts at: 0 946 2454 Size: 946 1508 SexAI A'CCwGG_T Cuts at: 0 460 2454 Size: 460 1994 SfcI C'TryA_G Cuts at: 0 160 1404 1907 2123 2312 2454 Size: 160 1244 503 216 189 142 Fragments arranged by size: 1244 503 216 189 160 142 SfoI GGC'GCC Cuts at: 0 1447 1881 2454 Size: 1447 434 573 Fragments arranged by size: 1447 573 434 SmlI C'TyrA_G Cuts at: 0 838 2454 Size: 838 1616 SphI G_CATG'C Cuts at: 0 24 1321 2454 Size: 24 1297 1133 Fragments arranged by size: 1297 1133 24 SspI AAT'ATT Cuts at: 0 402 2454 Size: 402 2052 StuI AGG'CCT Cuts at: 0 736 2454 Size: 736 1718 StyI C'CwwG_G Cuts at: 0 521 1112 1967 2096 2454 Size: 521 591 855 129 358 Fragments arranged by size: 855 591 521 358 129 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 1534 1560 1980 2454 Size: 1534 26 420 474 Fragments arranged by size: 1534 474 420 26 TatI w'GTAC_w Cuts at: 0 602 944 1380 2454 Size: 602 342 436 1074 Fragments arranged by size: 1074 602 436 342 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 667 699 1083 1115 1955 1987 2454 Size: 667 32 384 32 840 32 467 Fragments arranged by size: 840 667 467 384 32 32 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 42 435 2454 Size: 42 393 2019 Fragments arranged by size: 2019 393 42 XmnI GAAnn'nnTTC Cuts at: 0 10 83 2454 Size: 10 73 2371 Fragments arranged by size: 2371 73 10 Enzymes that do cut: AccI AcuI AfeI AflIII AloI AlwNI ApaI ApoI AvaI BamHI BanI BanII BbeI BbsI BbvCI BcgI BglI BglII BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BsrFI BsrGI BstXI BstYI Bsu36I BtgI CspCI DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I FalI HaeII Hin4I HincII HindIII KasI MfeI MmeI MscI MslI MspA1I NaeI NarI NgoMIV NspI PasI PflMI PfoI PmlI PpiI PpuMI PshAI PspOMI PstI PvuII SacI SacII SalI ScaI SexAI SfcI SfoI SmlI SphI SspI StuI StyI TaqII TatI TstI XcmI XmnI Enzymes that do not cut: AarI AatII Acc65I AclI AflII AgeI AhdI AleI AlfI ApaLI AscI AseI AsiSI AvrII BaeI BciVI BclI BfrBI BmtI BsaBI BsiWI BspHI BspMI BsrBI BsrDI BssHII BssSI BstAPI BstBI BstEII BstZ17I BtgZI BtsI ClaI DraI DraIII EcoRI EcoRV FseI FspI FspAI HpaI KpnI MluI NcoI NdeI NheI NotI NruI NsiI PacI PciI PmeI PsiI PspXI PsrI PvuI RsrII SanDI SapI SbfI SfiI SgfI SgrAI SmaI SnaBI SpeI SrfI SwaI Tth111I XbaI XhoI XmaI ZraI