(Linear) (Six-base) MAPSORT of: KIAA0750.seq Check: 546 from: 1 to: 3372 KIAA0750.orf With 182 enzymes: SgfI * February 28, 2007 11:21 .. AatII G_ACGT'C Cuts at: 0 653 3372 Size: 653 2719 Acc65I G'GTAC_C Cuts at: 0 79 1409 3372 Size: 79 1330 1963 Fragments arranged by size: 1963 1330 79 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 590 2783 2909 3372 Size: 590 2193 126 463 Fragments arranged by size: 2193 590 463 126 AflIII A'CryG_T Cuts at: 0 1388 2999 3001 3021 3372 Size: 1388 1611 2 20 351 Fragments arranged by size: 1611 1388 351 20 2 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 87 2405 3372 Size: 87 2318 967 Fragments arranged by size: 2318 967 87 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 2823 2855 3372 Size: 2823 32 517 Fragments arranged by size: 2823 517 32 AlwNI CAG_nnn'CTG Cuts at: 0 921 2166 3092 3372 Size: 921 1245 926 280 Fragments arranged by size: 1245 926 921 280 ApaLI G'TGCA_C Cuts at: 0 249 3372 Size: 249 3123 ApoI r'AATT_y Cuts at: 0 607 706 817 2463 2584 3145 3372 Size: 607 99 111 1646 121 561 227 Fragments arranged by size: 1646 607 561 227 121 111 99 AvaI C'yCGr_G Cuts at: 0 1016 1492 2490 3372 Size: 1016 476 998 882 Fragments arranged by size: 1016 998 882 476 BamHI G'GATC_C Cuts at: 0 1766 3372 Size: 1766 1606 BanI G'GyrC_C Cuts at: 0 79 661 1291 1409 1574 1867 3310 3372 Size: 79 582 630 118 165 293 1443 62 Fragments arranged by size: 1443 630 582 293 165 118 79 62 BanII G_rGCy'C Cuts at: 0 1507 1685 1859 2095 2378 2565 3372 Size: 1507 178 174 236 283 187 807 Fragments arranged by size: 1507 807 283 236 187 178 174 BbvCI CC'TCA_GC Cuts at: 0 1924 2843 3372 Size: 1924 919 529 Fragments arranged by size: 1924 919 529 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 2145 2179 3372 Size: 2145 34 1193 Fragments arranged by size: 2145 1193 34 BclI T'GATC_A Cuts at: 0 2916 3372 Size: 2916 456 BglI GCCn_nnn'nGGC Cuts at: 0 1212 3372 Size: 1212 2160 BglII A'GATC_T Cuts at: 0 852 1516 3372 Size: 852 664 1856 Fragments arranged by size: 1856 852 664 BlpI GC'TnA_GC Cuts at: 0 1822 3043 3372 Size: 1822 1221 329 Fragments arranged by size: 1822 1221 329 Bme1580I G_kGCm'C Cuts at: 0 253 1236 1294 1870 2363 3372 Size: 253 983 58 576 493 1009 Fragments arranged by size: 1009 983 576 493 253 58 BmrI ACTGGGnnnn_n' Cuts at: 0 1510 3325 3372 Size: 1510 1815 47 Fragments arranged by size: 1815 1510 47 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 3290 3372 Size: 3290 82 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 70 1324 1498 1515 1757 2536 2930 3372 Size: 70 1254 174 17 242 779 394 442 Fragments arranged by size: 1254 779 442 394 242 174 70 17 Bpu10I CC'TnA_GC Cuts at: 0 1679 1924 2407 2843 3372 Size: 1679 245 483 436 529 Fragments arranged by size: 1679 529 483 436 245 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 142 877 1222 2362 3372 Size: 142 735 345 1140 1010 Fragments arranged by size: 1140 1010 735 345 142 BsaAI yAC'GTr Cuts at: 0 71 2364 3002 3030 3372 Size: 71 2293 638 28 342 Fragments arranged by size: 2293 638 342 71 28 BsaBI GATnn'nnATC Cuts at: 0 730 3372 Size: 730 2642 BsaHI Gr'CG_yC Cuts at: 0 650 3372 Size: 650 2722 BsaWI w'CCGG_w Cuts at: 0 2008 3372 Size: 2008 1364 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 317 346 347 376 628 658 2611 2641 Size: 317 29 1 29 252 30 1953 30 Cuts at: 2641 2679 2709 3372 Size: 38 30 663 Fragments arranged by size: 1953 663 317 252 38 30 30 30 29 29 1 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 1527 2194 2311 2312 2693 3244 3247 3372 Size: 1527 667 117 1 381 551 3 125 Fragments arranged by size: 1527 667 551 381 125 117 3 1 BseYI C'CCAG_C Cuts at: 0 516 1555 2308 2448 2818 3372 Size: 516 1039 753 140 370 554 Fragments arranged by size: 1039 753 554 516 370 140 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 867 3372 Size: 867 2505 BsiHKAI G_wGCw'C Cuts at: 0 253 1484 1685 1859 2188 2254 2369 2378 Size: 253 1231 201 174 329 66 115 9 Cuts at: 2378 3372 Size: 994 Fragments arranged by size: 1231 994 329 253 201 174 115 66 9 BsmBI CGTCTCn'nnnn_ Cuts at: 0 2028 2726 3195 3372 Size: 2028 698 469 177 Fragments arranged by size: 2028 698 469 177 Bsp1286I G_dGCh'C Cuts at: 0 253 1236 1294 1484 1507 1685 1859 1870 Size: 253 983 58 190 23 178 174 11 Cuts at: 1870 2095 2188 2254 2363 2369 2378 2565 3372 Size: 225 93 66 109 6 9 187 807 Fragments arranged by size: 983 807 253 225 190 187 178 174 109 93 66 58 23 11 9 6 BspHI T'CATG_A Cuts at: 0 2204 3372 Size: 2204 1168 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 30 1010 1123 3372 Size: 30 980 113 2249 Fragments arranged by size: 2249 980 113 30 BsrBI CCG'CTC Cuts at: 0 1155 3372 Size: 1155 2217 BsrFI r'CCGG_y Cuts at: 0 1334 2241 3372 Size: 1334 907 1131 Fragments arranged by size: 1334 1131 907 BsrGI T'GTAC_A Cuts at: 0 2906 3372 Size: 2906 466 BssSI C'ACGA_G Cuts at: 0 1174 3372 Size: 1174 2198 BstAPI GCAn_nnn'nTGC Cuts at: 0 921 1033 1170 2402 3372 Size: 921 112 137 1232 970 Fragments arranged by size: 1232 970 921 137 112 BstEII G'GTnAC_C Cuts at: 0 168 3372 Size: 168 3204 BstYI r'GATC_y Cuts at: 0 852 1516 1766 3372 Size: 852 664 250 1606 Fragments arranged by size: 1606 852 664 250 Bsu36I CC'TnA_GG Cuts at: 0 2927 3372 Size: 2927 445 BtgI C'CryG_G Cuts at: 0 711 1217 1236 1781 1883 1990 2150 3372 Size: 711 506 19 545 102 107 160 1222 Fragments arranged by size: 1222 711 545 506 160 107 102 19 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 3149 3372 Size: 3149 223 BtsI GCAGTG_nn' Cuts at: 0 299 1644 2403 3302 3372 Size: 299 1345 759 899 70 Fragments arranged by size: 1345 899 759 299 70 DraIII CAC_nnn'GTG Cuts at: 0 263 1432 3372 Size: 263 1169 1940 Fragments arranged by size: 1940 1169 263 DrdI GACnn_nn'nnGTC Cuts at: 0 934 3372 Size: 934 2438 EaeI y'GGCC_r Cuts at: 0 669 1097 1748 1931 2168 2573 3113 3299 Size: 669 428 651 183 237 405 540 186 Cuts at: 3299 3372 Size: 73 Fragments arranged by size: 669 651 540 428 405 237 186 183 73 EarI CTCTTCn'nnn_ Cuts at: 0 343 776 1270 1864 1975 2259 2551 3193 Size: 343 433 494 594 111 284 292 642 Cuts at: 3193 3372 Size: 179 Fragments arranged by size: 642 594 494 433 343 292 284 179 111 EcoICRI GAG'CTC Cuts at: 0 1683 1857 2376 3372 Size: 1683 174 519 996 Fragments arranged by size: 1683 996 519 174 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 70 590 1324 1498 1515 1757 2536 2783 Size: 70 520 734 174 17 242 779 247 Cuts at: 2783 2909 2930 3372 Size: 126 21 442 Fragments arranged by size: 779 734 520 442 247 242 174 126 70 21 17 EcoNI CCTnn'n_nnAGG Cuts at: 0 499 3372 Size: 499 2873 EcoO109I rG'GnC_Cy Cuts at: 0 283 414 828 1439 3372 Size: 283 131 414 611 1933 Fragments arranged by size: 1933 611 414 283 131 EcoRI G'AATT_C Cuts at: 0 706 3372 Size: 706 2666 EcoRV GAT'ATC Cuts at: 0 1548 3372 Size: 1548 1824 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 3180 3372 Size: 3180 192 FspI TGC'GCA Cuts at: 0 298 3294 3372 Size: 298 2996 78 Fragments arranged by size: 2996 298 78 HaeII r_GCGC'y Cuts at: 0 3050 3372 Size: 3050 322 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 346 378 512 544 1783 1815 2941 2973 Size: 346 32 134 32 1239 32 1126 32 Cuts at: 2973 3372 Size: 399 Fragments arranged by size: 1239 1126 399 346 134 32 32 32 32 HincII GTy'rAC Cuts at: 0 1524 1608 2760 3372 Size: 1524 84 1152 612 Fragments arranged by size: 1524 1152 612 84 KpnI G_GTAC'C Cuts at: 0 83 1413 3372 Size: 83 1330 1959 Fragments arranged by size: 1959 1330 83 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 614 1373 3372 Size: 614 759 1999 Fragments arranged by size: 1999 759 614 MscI TGG'CCA Cuts at: 0 1099 1933 2170 2575 3372 Size: 1099 834 237 405 797 Fragments arranged by size: 1099 834 797 405 237 MslI CAynn'nnrTG Cuts at: 0 69 536 964 1831 3372 Size: 69 467 428 867 1541 Fragments arranged by size: 1541 867 467 428 69 MspA1I CmG'CkG Cuts at: 0 766 1050 1170 2163 2448 2734 2847 2870 Size: 766 284 120 993 285 286 113 23 Cuts at: 2870 2887 3083 3372 Size: 17 196 289 Fragments arranged by size: 993 766 289 286 285 284 196 120 113 23 17 NcoI C'CATG_G Cuts at: 0 1217 2150 3372 Size: 1217 933 1222 Fragments arranged by size: 1222 1217 933 NspI r_CATG'y Cuts at: 0 1122 1606 3372 Size: 1122 484 1766 Fragments arranged by size: 1766 1122 484 PasI CC'CwG_GG Cuts at: 0 1399 3372 Size: 1399 1973 PflMI CCAn_nnn'nTGG Cuts at: 0 1631 3367 3372 Size: 1631 1736 5 Fragments arranged by size: 1736 1631 5 PfoI T'CCnGG_A Cuts at: 0 364 1531 3372 Size: 364 1167 1841 Fragments arranged by size: 1841 1167 364 PmlI CAC'GTG Cuts at: 0 71 2364 3002 3372 Size: 71 2293 638 370 Fragments arranged by size: 2293 638 370 71 PpuMI rG'GwC_Cy Cuts at: 0 283 828 3372 Size: 283 545 2544 Fragments arranged by size: 2544 545 283 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 0 853 885 3372 Size: 853 32 2487 Fragments arranged by size: 2487 853 32 PstI C_TGCA'G Cuts at: 0 1029 2531 2886 3088 3372 Size: 1029 1502 355 202 284 Fragments arranged by size: 1502 1029 355 284 202 PvuII CAG'CTG Cuts at: 0 1050 1170 2163 2448 2734 2847 2887 3372 Size: 1050 120 993 285 286 113 40 485 Fragments arranged by size: 1050 993 485 286 285 120 113 40 SacI G_AGCT'C Cuts at: 0 1685 1859 2378 3372 Size: 1685 174 519 994 Fragments arranged by size: 1685 994 519 174 SapI GCTCTTCn'nnn_ Cuts at: 0 1270 1864 2259 3372 Size: 1270 594 395 1113 Fragments arranged by size: 1270 1113 594 395 SexAI A'CCwGG_T Cuts at: 0 1570 3372 Size: 1570 1802 SfcI C'TryA_G Cuts at: 0 484 617 1025 2443 2527 2882 3084 3372 Size: 484 133 408 1418 84 355 202 288 Fragments arranged by size: 1418 484 408 355 288 202 133 84 SmaI CCC'GGG Cuts at: 0 1018 3372 Size: 1018 2354 SmlI C'TyrA_G Cuts at: 0 157 856 1201 1492 2377 3372 Size: 157 699 345 291 885 995 Fragments arranged by size: 995 885 699 345 291 157 StuI AGG'CCT Cuts at: 0 91 2678 3372 Size: 91 2587 694 Fragments arranged by size: 2587 694 91 StyI C'CwwG_G Cuts at: 0 164 773 1217 1975 2150 2416 3372 Size: 164 609 444 758 175 266 956 Fragments arranged by size: 956 758 609 444 266 175 164 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 901 1177 2322 2440 3372 Size: 901 276 1145 118 932 Fragments arranged by size: 1145 932 901 276 118 TatI w'GTAC_w Cuts at: 0 1385 2906 3372 Size: 1385 1521 466 Fragments arranged by size: 1521 1385 466 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 317 349 432 464 2611 2643 3372 Size: 317 32 83 32 2147 32 729 Fragments arranged by size: 2147 729 317 83 32 32 32 XbaI T'CTAG_A Cuts at: 0 558 3372 Size: 558 2814 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 336 2085 3108 3312 3372 Size: 336 1749 1023 204 60 Fragments arranged by size: 1749 1023 336 204 60 XhoI C'TCGA_G Cuts at: 0 1492 3372 Size: 1492 1880 XmaI C'CCGG_G Cuts at: 0 1016 3372 Size: 1016 2356 XmnI GAAnn'nnTTC Cuts at: 0 2044 2546 3372 Size: 2044 502 826 Fragments arranged by size: 2044 826 502 ZraI GAC'GTC Cuts at: 0 651 3372 Size: 651 2721 Enzymes that do cut: AatII Acc65I AcuI AflIII AlfI AloI AlwNI ApaLI ApoI AvaI BamHI BanI BanII BbvCI BcgI BclI BglI BglII BlpI Bme1580I BmrI BplI BpmI Bpu10I BpuEI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiHKAI BsmBI Bsp1286I BspHI BspMI BsrBI BsrFI BsrGI BssSI BstAPI BstEII BstYI Bsu36I BtgI BtgZI BtsI DraIII DrdI EaeI EarI EcoICRI Eco57MI EcoNI EcoO109I EcoRI EcoRV FalI FspI HaeII Hin4I HincII KpnI MmeI MscI MslI MspA1I NcoI NspI PasI PflMI PfoI PmlI PpuMI PsrI PstI PvuII SacI SapI SexAI SfcI SmaI SmlI StuI StyI TaqII TatI TstI XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AarI AccI AclI AfeI AflII AgeI AhdI AleI ApaI AscI AseI AsiSI AvrII BaeI BbeI BbsI BciVI BfrBI BmgBI BmtI BsaI BsiEI BsiWI BsmI BspEI BsrDI BssHII BstBI BstXI BstZ17I ClaI CspCI DraI EagI EciI FseI FspAI HindIII HpaI KasI MfeI MluI NaeI NarI NdeI NgoMIV NheI NotI NruI NsiI PacI PciI PmeI PpiI PshAI PsiI PspOMI PspXI PvuI RsrII SacII SalI SanDI SbfI ScaI SfiI SfoI SgfI SgrAI SnaBI SpeI SphI SrfI SspI SwaI Tth111I