(Linear) (Six-base) MAPSORT of: KIAA1109.seq Check: 858 from: 1 to: 9048 KIAA1109.orf With 182 enzymes: SgfI * February 28, 2007 11:22 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 1285 9048 Size: 1285 7763 AatII G_ACGT'C Cuts at: 0 6870 9048 Size: 6870 2178 AccI GT'mk_AC Cuts at: 0 6420 7807 9048 Size: 6420 1387 1241 Fragments arranged by size: 6420 1387 1241 AclI AA'CG_TT Cuts at: 0 4746 7274 9048 Size: 4746 2528 1774 Fragments arranged by size: 4746 2528 1774 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 2111 2195 2455 2704 3785 4148 4592 4976 Size: 2111 84 260 249 1081 363 444 384 Cuts at: 4976 5192 5923 6593 7130 7556 7566 7588 8129 Size: 216 731 670 537 426 10 22 541 Cuts at: 8129 8563 9048 Size: 434 485 Fragments arranged by size: 2111 1081 731 670 541 537 485 444 434 426 384 363 260 249 216 84 22 10 AflII C'TTAA_G Cuts at: 0 2461 4915 7597 9048 Size: 2461 2454 2682 1451 Fragments arranged by size: 2682 2461 2454 1451 AflIII A'CryG_T Cuts at: 0 2257 9048 Size: 2257 6791 AhdI GACnn_n'nnGTC Cuts at: 0 3691 5055 5196 9048 Size: 3691 1364 141 3852 Fragments arranged by size: 3852 3691 1364 141 AleI CACnn'nnGTG Cuts at: 0 76 8389 8591 9048 Size: 76 8313 202 457 Fragments arranged by size: 8313 457 202 76 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 5620 9048 Size: 5620 3428 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 6666 6698 9048 Size: 6666 32 2350 Fragments arranged by size: 6666 2350 32 AlwNI CAG_nnn'CTG Cuts at: 0 537 4342 4603 6616 9048 Size: 537 3805 261 2013 2432 Fragments arranged by size: 3805 2432 2013 537 261 ApaI G_GGCC'C Cuts at: 0 8070 9048 Size: 8070 978 ApaLI G'TGCA_C Cuts at: 0 1620 3071 9048 Size: 1620 1451 5977 Fragments arranged by size: 5977 1620 1451 ApoI r'AATT_y Cuts at: 0 47 215 634 1998 2920 2968 3485 4055 Size: 47 168 419 1364 922 48 517 570 Cuts at: 4055 4256 4503 4739 6196 6821 6894 7511 7765 Size: 201 247 236 1457 625 73 617 254 Cuts at: 7765 8046 8397 9048 Size: 281 351 651 Fragments arranged by size: 1457 1364 922 651 625 617 570 517 419 351 281 254 247 236 201 168 73 48 47 AseI AT'TA_AT Cuts at: 0 1570 8836 9048 Size: 1570 7266 212 Fragments arranged by size: 7266 1570 212 AvaI C'yCGr_G Cuts at: 0 4940 9048 Size: 4940 4108 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 0 4188 4221 9048 Size: 4188 33 4827 Fragments arranged by size: 4827 4188 33 BamHI G'GATC_C Cuts at: 0 1382 2441 4413 8952 9048 Size: 1382 1059 1972 4539 96 Fragments arranged by size: 4539 1972 1382 1059 96 BanI G'GyrC_C Cuts at: 0 4300 6691 9048 Size: 4300 2391 2357 Fragments arranged by size: 4300 2391 2357 BanII G_rGCy'C Cuts at: 0 2245 4964 6605 7561 7803 8070 8615 9048 Size: 2245 2719 1641 956 242 267 545 433 Fragments arranged by size: 2719 2245 1641 956 545 433 267 242 BbsI GAAGACnn'nnnn_ Cuts at: 0 595 1156 2201 2692 4484 4596 4911 5192 Size: 595 561 1045 491 1792 112 315 281 Cuts at: 5192 5246 6116 9048 Size: 54 870 2932 Fragments arranged by size: 2932 1792 1045 870 595 561 491 315 281 112 54 BbvCI CC'TCA_GC Cuts at: 0 1203 2342 2738 2927 9048 Size: 1203 1139 396 189 6121 Fragments arranged by size: 6121 1203 1139 396 189 BciVI GTATCCnnnnn_n' Cuts at: 0 1389 4000 4216 5016 6735 7576 9048 Size: 1389 2611 216 800 1719 841 1472 Fragments arranged by size: 2611 1719 1472 1389 841 800 216 BclI T'GATC_A Cuts at: 0 8142 9048 Size: 8142 906 BfrBI ATG'CAT Cuts at: 0 97 236 6230 6491 9048 Size: 97 139 5994 261 2557 Fragments arranged by size: 5994 2557 261 139 97 BglI GCCn_nnn'nGGC Cuts at: 0 6410 9048 Size: 6410 2638 BglII A'GATC_T Cuts at: 0 82 2011 7734 9048 Size: 82 1929 5723 1314 Fragments arranged by size: 5723 1929 1314 82 BlpI GC'TnA_GC Cuts at: 0 530 8609 9048 Size: 530 8079 439 Fragments arranged by size: 8079 530 439 Bme1580I G_kGCm'C Cuts at: 0 1624 1647 2673 3075 8070 9048 Size: 1624 23 1026 402 4995 978 Fragments arranged by size: 4995 1624 1026 978 402 23 BmgBI CAC'GTC Cuts at: 0 868 9048 Size: 868 8180 BmrI ACTGGGnnnn_n' Cuts at: 0 7496 9048 Size: 7496 1552 BmtI G_CTAG'C Cuts at: 0 4610 6368 9048 Size: 4610 1758 2680 Fragments arranged by size: 4610 2680 1758 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 749 836 2596 4015 4118 5120 5709 6304 Size: 749 87 1760 1419 103 1002 589 595 Cuts at: 6304 6347 7744 7934 8121 8808 9048 Size: 43 1397 190 187 687 240 Fragments arranged by size: 1760 1419 1397 1002 749 687 595 589 240 190 187 103 87 43 Bpu10I CC'TnA_GC Cuts at: 0 1203 2342 2738 2927 9048 Size: 1203 1139 396 189 6121 Fragments arranged by size: 6121 1203 1139 396 189 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 157 231 1573 6495 6667 7545 9048 Size: 157 74 1342 4922 172 878 1503 Fragments arranged by size: 4922 1503 1342 878 172 157 74 BsaI GGTCTCn'nnnn_ Cuts at: 0 4094 6875 9048 Size: 4094 2781 2173 Fragments arranged by size: 4094 2781 2173 BsaBI GATnn'nnATC Cuts at: 0 3671 3731 9048 Size: 3671 60 5317 Fragments arranged by size: 5317 3671 60 BsaHI Gr'CG_yC Cuts at: 0 6867 8259 9048 Size: 6867 1392 789 Fragments arranged by size: 6867 1392 789 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 834 864 3141 3171 4539 4569 4803 4833 Size: 834 30 2277 30 1368 30 234 30 Cuts at: 4833 5657 5687 5784 5814 7167 7197 7415 7445 Size: 824 30 97 30 1353 30 218 30 Cuts at: 7445 9048 Size: 1603 Fragments arranged by size: 2277 1603 1368 1353 834 824 234 218 97 30 30 30 30 30 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 956 3481 5050 5789 5798 5915 6290 6613 Size: 956 2525 1569 739 9 117 375 323 Cuts at: 6613 7439 8438 8957 9048 Size: 826 999 519 91 Fragments arranged by size: 2525 1569 999 956 826 739 519 375 323 117 91 9 BseYI C'CCAG_C Cuts at: 0 871 5858 7110 9048 Size: 871 4987 1252 1938 Fragments arranged by size: 4987 1938 1252 871 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 355 928 4064 8984 9048 Size: 355 573 3136 4920 64 Fragments arranged by size: 4920 3136 573 355 64 BsiHKAI G_wGCw'C Cuts at: 0 1624 3075 4964 7803 8615 9048 Size: 1624 1451 1889 2839 812 433 Fragments arranged by size: 2839 1889 1624 1451 812 433 BsmI GAATG_Cn' Cuts at: 0 797 4284 5156 6232 7985 9048 Size: 797 3487 872 1076 1753 1063 Fragments arranged by size: 3487 1753 1076 1063 872 797 BsmBI CGTCTCn'nnnn_ Cuts at: 0 5294 9048 Size: 5294 3754 Bsp1286I G_dGCh'C Cuts at: 0 1624 1647 2245 2673 3075 4964 6605 7561 Size: 1624 23 598 428 402 1889 1641 956 Cuts at: 7561 7803 8070 8615 9048 Size: 242 267 545 433 Fragments arranged by size: 1889 1641 1624 956 598 545 433 428 402 267 242 23 BspHI T'CATG_A Cuts at: 0 1656 3383 8628 9048 Size: 1656 1727 5245 420 Fragments arranged by size: 5245 1727 1656 420 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1285 9048 Size: 1285 7763 BsrDI GCAATG_nn' Cuts at: 0 4490 5944 9048 Size: 4490 1454 3104 Fragments arranged by size: 4490 3104 1454 BsrFI r'CCGG_y Cuts at: 0 695 5593 9048 Size: 695 4898 3455 Fragments arranged by size: 4898 3455 695 BsrGI T'GTAC_A Cuts at: 0 267 3369 8160 9048 Size: 267 3102 4791 888 Fragments arranged by size: 4791 3102 888 267 BssSI C'ACGA_G Cuts at: 0 7541 9048 Size: 7541 1507 BstAPI GCAn_nnn'nTGC Cuts at: 0 4603 9048 Size: 4603 4445 BstBI TT'CG_AA Cuts at: 0 2772 9048 Size: 2772 6276 BstEII G'GTnAC_C Cuts at: 0 8199 9048 Size: 8199 849 BstXI CCAn_nnnn'nTGG Cuts at: 0 4015 6842 9048 Size: 4015 2827 2206 Fragments arranged by size: 4015 2827 2206 BstYI r'GATC_y Cuts at: 0 82 1382 1831 2011 2441 4413 5731 6087 Size: 82 1300 449 180 430 1972 1318 356 Cuts at: 6087 7734 8952 9048 Size: 1647 1218 96 Fragments arranged by size: 1972 1647 1318 1300 1218 449 430 356 180 96 82 BtgI C'CryG_G Cuts at: 0 2445 7228 7677 8280 9048 Size: 2445 4783 449 603 768 Fragments arranged by size: 4783 2445 768 603 449 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 428 9048 Size: 428 8620 BtsI GCAGTG_nn' Cuts at: 0 125 475 836 984 1689 4151 6482 9048 Size: 125 350 361 148 705 2462 2331 2566 Fragments arranged by size: 2566 2462 2331 705 361 350 148 125 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 579 614 1085 1120 1158 1193 2039 2074 Size: 579 35 471 35 38 35 846 35 Cuts at: 2074 8193 8228 9048 Size: 6119 35 820 Fragments arranged by size: 6119 846 820 579 471 38 35 35 35 35 35 DraI TTT'AAA Cuts at: 0 185 504 3671 3750 6795 8490 9048 Size: 185 319 3167 79 3045 1695 558 Fragments arranged by size: 3167 3045 1695 558 319 185 79 DrdI GACnn_nn'nnGTC Cuts at: 0 1160 8711 9048 Size: 1160 7551 337 Fragments arranged by size: 7551 1160 337 EaeI y'GGCC_r Cuts at: 0 3533 5344 6411 9048 Size: 3533 1811 1067 2637 Fragments arranged by size: 3533 2637 1811 1067 EarI CTCTTCn'nnn_ Cuts at: 0 1370 2431 4167 4782 4952 5168 6147 7152 Size: 1370 1061 1736 615 170 216 979 1005 Cuts at: 7152 7327 8330 9048 Size: 175 1003 718 Fragments arranged by size: 1736 1370 1061 1005 1003 979 718 615 216 175 170 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 7823 9048 Size: 7823 1225 EcoICRI GAG'CTC Cuts at: 0 4962 7801 8613 9048 Size: 4962 2839 812 435 Fragments arranged by size: 4962 2839 812 435 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 749 836 2111 2195 2455 2596 2704 3785 Size: 749 87 1275 84 260 141 108 1081 Cuts at: 3785 4015 4118 4148 4592 4976 5120 5192 5709 Size: 230 103 30 444 384 144 72 517 Cuts at: 5709 5923 6304 6347 6593 7130 7556 7566 7588 Size: 214 381 43 246 537 426 10 22 Cuts at: 7588 7744 7934 8121 8129 8563 8808 9048 Size: 156 190 187 8 434 245 240 Fragments arranged by size: 1275 1081 749 537 517 444 434 426 384 381 260 246 245 240 230 214 190 187 156 144 141 108 103 87 84 72 43 30 22 10 8 EcoNI CCTnn'n_nnAGG Cuts at: 0 6572 9048 Size: 6572 2476 EcoO109I rG'GnC_Cy Cuts at: 0 7223 8067 9048 Size: 7223 844 981 Fragments arranged by size: 7223 981 844 EcoRI G'AATT_C Cuts at: 0 1998 8397 9048 Size: 1998 6399 651 Fragments arranged by size: 6399 1998 651 EcoRV GAT'ATC Cuts at: 0 4659 7715 9048 Size: 4659 3056 1333 Fragments arranged by size: 4659 3056 1333 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 595 2141 3835 6992 9048 Size: 595 1546 1694 3157 2056 Fragments arranged by size: 3157 2056 1694 1546 595 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 1024 1054 1056 1086 1248 1280 2292 2324 Size: 1024 30 2 30 162 32 1012 32 Cuts at: 2324 3677 3709 3773 3805 4537 4569 4972 5004 Size: 1353 32 64 32 732 32 403 32 Cuts at: 5004 5041 5073 5182 5214 5490 5511 5522 5543 Size: 37 32 109 32 276 21 11 21 Cuts at: 5543 6288 6304 6320 6336 6766 6798 7455 7487 Size: 745 16 16 16 430 32 657 32 Cuts at: 7487 8097 8129 8476 8508 8623 8655 8725 8757 Size: 610 32 347 32 115 32 70 32 Cuts at: 8757 9048 Size: 291 Fragments arranged by size: 1353 1024 1012 745 732 657 610 430 403 347 291 276 162 115 109 70 64 37 32 32 32 32 32 32 32 32 32 32 32 32 32 32 30 30 21 21 16 16 16 11 2 HincII GTy'rAC Cuts at: 0 35 3149 6421 7724 9048 Size: 35 3114 3272 1303 1324 Fragments arranged by size: 3272 3114 1324 1303 35 HindIII A'AGCT_T Cuts at: 0 930 3614 6974 7600 9048 Size: 930 2684 3360 626 1448 Fragments arranged by size: 3360 2684 1448 930 626 MfeI C'AATT_G Cuts at: 0 3839 9048 Size: 3839 5209 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 843 1216 2212 7413 9048 Size: 843 373 996 5201 1635 Fragments arranged by size: 5201 1635 996 843 373 MscI TGG'CCA Cuts at: 0 5346 9048 Size: 5346 3702 MslI CAynn'nnrTG Cuts at: 0 76 92 566 572 1033 2084 2525 3142 Size: 76 16 474 6 461 1051 441 617 Cuts at: 3142 6524 7024 8028 8389 8591 8593 9048 Size: 3382 500 1004 361 202 2 455 Fragments arranged by size: 3382 1051 1004 617 500 474 461 455 441 361 202 76 16 6 2 MspA1I CmG'CkG Cuts at: 0 111 139 2131 4342 6043 9048 Size: 111 28 1992 2211 1701 3005 Fragments arranged by size: 3005 2211 1992 1701 111 28 NcoI C'CATG_G Cuts at: 0 2445 7228 7677 8280 9048 Size: 2445 4783 449 603 768 Fragments arranged by size: 4783 2445 768 603 449 NdeI CA'TA_TG Cuts at: 0 2081 3953 6525 7058 8018 9048 Size: 2081 1872 2572 533 960 1030 Fragments arranged by size: 2572 2081 1872 1030 960 533 NheI G'CTAG_C Cuts at: 0 4606 6364 9048 Size: 4606 1758 2684 Fragments arranged by size: 4606 2684 1758 NsiI A_TGCA'T Cuts at: 0 99 238 6232 6493 9048 Size: 99 139 5994 261 2555 Fragments arranged by size: 5994 2555 261 139 99 NspI r_CATG'y Cuts at: 0 97 862 1732 2261 2350 4160 6234 6491 Size: 97 765 870 529 89 1810 2074 257 Cuts at: 6491 6495 7029 7386 8033 9048 Size: 4 534 357 647 1015 Fragments arranged by size: 2074 1810 1015 870 765 647 534 529 357 257 97 89 4 PasI CC'CwG_GG Cuts at: 0 6913 9048 Size: 6913 2135 PciI A'CATG_T Cuts at: 0 2257 9048 Size: 2257 6791 PflMI CCAn_nnn'nTGG Cuts at: 0 142 6907 7975 8281 9048 Size: 142 6765 1068 306 767 Fragments arranged by size: 6765 1068 767 306 142 PfoI T'CCnGG_A Cuts at: 0 953 4992 5018 5136 5515 5661 7760 9048 Size: 953 4039 26 118 379 146 2099 1288 Fragments arranged by size: 4039 2099 1288 953 379 146 118 26 PpuMI rG'GwC_Cy Cuts at: 0 7223 9048 Size: 7223 1825 PsiI TTA'TAA Cuts at: 0 1679 3896 9048 Size: 1679 2217 5152 Fragments arranged by size: 5152 2217 1679 PspOMI G'GGCC_C Cuts at: 0 8066 9048 Size: 8066 982 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 0 1002 1034 5399 5431 9048 Size: 1002 32 4365 32 3617 Fragments arranged by size: 4365 3617 1002 32 32 PstI C_TGCA'G Cuts at: 0 5880 6312 9048 Size: 5880 432 2736 Fragments arranged by size: 5880 2736 432 PvuII CAG'CTG Cuts at: 0 111 139 2131 4342 6043 9048 Size: 111 28 1992 2211 1701 3005 Fragments arranged by size: 3005 2211 1992 1701 111 28 SacI G_AGCT'C Cuts at: 0 4964 7803 8615 9048 Size: 4964 2839 812 433 Fragments arranged by size: 4964 2839 812 433 SalI G'TCGA_C Cuts at: 0 6419 9048 Size: 6419 2629 SanDI GG'GwC_CC Cuts at: 0 7223 9048 Size: 7223 1825 SapI GCTCTTCn'nnn_ Cuts at: 0 4167 4952 7327 8330 9048 Size: 4167 785 2375 1003 718 Fragments arranged by size: 4167 2375 1003 785 718 ScaI AGT'ACT Cuts at: 0 4143 9048 Size: 4143 4905 SexAI A'CCwGG_T Cuts at: 0 705 3984 6381 9048 Size: 705 3279 2397 2667 Fragments arranged by size: 3279 2667 2397 705 SfcI C'TryA_G Cuts at: 0 2246 2627 2664 2825 4325 5384 5617 5876 Size: 2246 381 37 161 1500 1059 233 259 Cuts at: 5876 6152 6308 9004 9048 Size: 276 156 2696 44 Fragments arranged by size: 2696 2246 1500 1059 381 276 259 233 161 156 44 37 SmlI C'TyrA_G Cuts at: 0 172 210 1552 2461 4915 4940 6474 6646 Size: 172 38 1342 909 2454 25 1534 172 Cuts at: 6646 7560 7597 9048 Size: 914 37 1451 Fragments arranged by size: 2454 1534 1451 1342 914 909 172 172 38 37 25 SpeI A'CTAG_T Cuts at: 0 6114 7321 9048 Size: 6114 1207 1727 Fragments arranged by size: 6114 1727 1207 SphI G_CATG'C Cuts at: 0 4160 6491 9048 Size: 4160 2331 2557 Fragments arranged by size: 4160 2557 2331 SspI AAT'ATT Cuts at: 0 2198 2538 5397 8094 9048 Size: 2198 340 2859 2697 954 Fragments arranged by size: 2859 2697 2198 954 340 StuI AGG'CCT Cuts at: 0 4012 9048 Size: 4012 5036 StyI C'CwwG_G Cuts at: 0 895 1314 2445 6876 7228 7677 8280 8470 Size: 895 419 1131 4431 352 449 603 190 Cuts at: 8470 9048 Size: 578 Fragments arranged by size: 4431 1131 895 603 578 449 419 352 190 SwaI ATTT'AAAT Cuts at: 0 3671 9048 Size: 3671 5377 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 818 1197 5468 5596 7036 9048 Size: 818 379 4271 128 1440 2012 Fragments arranged by size: 4271 2012 1440 818 379 128 TatI w'GTAC_w Cuts at: 0 267 1421 2602 3369 4141 5445 8160 9048 Size: 267 1154 1181 767 772 1304 2715 888 Fragments arranged by size: 2715 1304 1181 1154 888 772 767 267 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 834 866 3226 3258 4377 4409 5835 5867 Size: 834 32 2360 32 1119 32 1426 32 Cuts at: 5867 7308 7340 9048 Size: 1441 32 1708 Fragments arranged by size: 2360 1708 1441 1426 1119 834 32 32 32 32 32 XbaI T'CTAG_A Cuts at: 0 1906 8817 9048 Size: 1906 6911 231 Fragments arranged by size: 6911 1906 231 XhoI C'TCGA_G Cuts at: 0 4940 9048 Size: 4940 4108 XmnI GAAnn'nnTTC Cuts at: 0 3379 6627 7161 9048 Size: 3379 3248 534 1887 Fragments arranged by size: 3379 3248 1887 534 ZraI GAC'GTC Cuts at: 0 6868 9048 Size: 6868 2180 Enzymes that do cut: AarI AatII AccI AclI AcuI AflII AflIII AhdI AleI AlfI AloI AlwNI ApaI ApaLI ApoI AseI AvaI BaeI BamHI BanI BanII BbsI BbvCI BciVI BclI BfrBI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BpmI Bpu10I BpuEI BsaI BsaBI BsaHI BsaXI BseRI BseYI BsgI BsiHKAI BsmI BsmBI Bsp1286I BspHI BspMI BsrDI BsrFI BsrGI BssSI BstAPI BstBI BstEII BstXI BstYI BtgI BtgZI BtsI CspCI DraI DrdI EaeI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI EcoRV FalI Hin4I HincII HindIII MfeI MmeI MscI MslI MspA1I NcoI NdeI NheI NsiI NspI PasI PciI PflMI PfoI PpuMI PsiI PspOMI PsrI PstI PvuII SacI SalI SanDI SapI ScaI SexAI SfcI SmlI SpeI SphI SspI StuI StyI SwaI TaqII TatI TstI XbaI XhoI XmnI ZraI Enzymes that do not cut: Acc65I AfeI AgeI AscI AsiSI AvrII BbeI BcgI BplI BsaAI BsaWI BsiEI BsiWI BspEI BsrBI BssHII BstZ17I Bsu36I ClaI DraIII EagI FseI FspI FspAI HaeII HpaI KasI KpnI MluI NaeI NarI NgoMIV NotI NruI PacI PmeI PmlI PpiI PshAI PspXI PvuI RsrII SacII SbfI SfiI SfoI SgfI SgrAI SmaI SnaBI SrfI Tth111I XcmI XmaI