(Linear) (Six-base) MAPSORT of: KIAA1144.seq Check: 137 from: 1 to: 1431 KIAA1144.orf With 182 enzymes: SgfI * October 24, 2006 15:08 .. AatII G_ACGT'C Cuts at: 0 194 1431 Size: 194 1237 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 285 549 1431 Size: 285 264 882 Fragments arranged by size: 882 285 264 AflIII A'CryG_T Cuts at: 0 23 1431 Size: 23 1408 AhdI GACnn_n'nnGTC Cuts at: 0 795 1431 Size: 795 636 AleI CACnn'nnGTG Cuts at: 0 823 1431 Size: 823 608 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 661 693 1431 Size: 661 32 738 Fragments arranged by size: 738 661 32 AlwNI CAG_nnn'CTG Cuts at: 0 15 888 1431 Size: 15 873 543 Fragments arranged by size: 873 543 15 AvaI C'yCGr_G Cuts at: 0 115 388 1431 Size: 115 273 1043 Fragments arranged by size: 1043 273 115 AvrII C'CTAG_G Cuts at: 0 673 1431 Size: 673 758 BanI G'GyrC_C Cuts at: 0 1253 1431 Size: 1253 178 BanII G_rGCy'C Cuts at: 0 173 230 389 1396 1431 Size: 173 57 159 1007 35 Fragments arranged by size: 1007 173 159 57 35 BbeI G_GCGC'C Cuts at: 0 1257 1431 Size: 1257 174 BbsI GAAGACnn'nnnn_ Cuts at: 0 285 428 555 1431 Size: 285 143 127 876 Fragments arranged by size: 876 285 143 127 BlpI GC'TnA_GC Cuts at: 0 281 553 1431 Size: 281 272 878 Fragments arranged by size: 878 281 272 BmgBI CAC'GTC Cuts at: 0 24 273 434 1431 Size: 24 249 161 997 Fragments arranged by size: 997 249 161 24 BmrI ACTGGGnnnn_n' Cuts at: 0 330 1431 Size: 330 1101 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 187 1431 Size: 187 1244 Bpu10I CC'TnA_GC Cuts at: 0 224 1431 Size: 224 1207 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 742 1288 1431 Size: 742 546 143 Fragments arranged by size: 742 546 143 BsaAI yAC'GTr Cuts at: 0 240 1431 Size: 240 1191 BsaBI GATnn'nnATC Cuts at: 0 58 901 1021 1431 Size: 58 843 120 410 Fragments arranged by size: 843 410 120 58 BsaHI Gr'CG_yC Cuts at: 0 191 470 1254 1431 Size: 191 279 784 177 Fragments arranged by size: 784 279 191 177 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 301 331 457 487 1431 Size: 301 30 126 30 944 Fragments arranged by size: 944 301 126 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 96 1072 1431 Size: 96 976 359 Fragments arranged by size: 976 359 96 BsiEI CG_ry'CG Cuts at: 0 216 1431 Size: 216 1215 BsiHKAI G_wGCw'C Cuts at: 0 173 230 430 695 850 1396 1431 Size: 173 57 200 265 155 546 35 Fragments arranged by size: 546 265 200 173 155 57 35 BsmI GAATG_Cn' Cuts at: 0 777 1431 Size: 777 654 BsmBI CGTCTCn'nnnn_ Cuts at: 0 112 1431 Size: 112 1319 Bsp1286I G_dGCh'C Cuts at: 0 173 230 389 430 695 850 1396 1431 Size: 173 57 159 41 265 155 546 35 Fragments arranged by size: 546 265 173 159 155 57 41 35 BsrBI CCG'CTC Cuts at: 0 947 1431 Size: 947 484 BsrDI GCAATG_nn' Cuts at: 0 701 1431 Size: 701 730 BsrFI r'CCGG_y Cuts at: 0 4 259 1250 1431 Size: 4 255 991 181 Fragments arranged by size: 991 255 181 4 BssSI C'ACGA_G Cuts at: 0 1198 1431 Size: 1198 233 BstAPI GCAn_nnn'nTGC Cuts at: 0 102 1431 Size: 102 1329 BstBI TT'CG_AA Cuts at: 0 680 1431 Size: 680 751 BstXI CCAn_nnnn'nTGG Cuts at: 0 585 1431 Size: 585 846 BstYI r'GATC_y Cuts at: 0 53 449 902 1431 Size: 53 396 453 529 Fragments arranged by size: 529 453 396 53 Bsu36I CC'TnA_GG Cuts at: 0 889 1431 Size: 889 542 BtgI C'CryG_G Cuts at: 0 369 1010 1031 1151 1431 Size: 369 641 21 120 280 Fragments arranged by size: 641 369 280 120 21 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 191 1431 Size: 191 1240 DraI TTT'AAA Cuts at: 0 1415 1431 Size: 1415 16 DraIII CAC_nnn'GTG Cuts at: 0 611 1402 1431 Size: 611 791 29 Fragments arranged by size: 791 611 29 EaeI y'GGCC_r Cuts at: 0 6 372 728 923 1073 1431 Size: 6 366 356 195 150 358 Fragments arranged by size: 366 358 356 195 150 6 EarI CTCTTCn'nnn_ Cuts at: 0 235 1431 Size: 235 1196 EcoICRI GAG'CTC Cuts at: 0 171 228 1394 1431 Size: 171 57 1166 37 Fragments arranged by size: 1166 171 57 37 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 187 285 549 1431 Size: 187 98 264 882 Fragments arranged by size: 882 264 187 98 EcoO109I rG'GnC_Cy Cuts at: 0 669 885 1068 1314 1431 Size: 669 216 183 246 117 Fragments arranged by size: 669 246 216 183 117 FspI TGC'GCA Cuts at: 0 1282 1431 Size: 1282 149 HaeII r_GCGC'y Cuts at: 0 529 1257 1431 Size: 529 728 174 Fragments arranged by size: 728 529 174 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 781 813 1431 Size: 781 32 618 Fragments arranged by size: 781 618 32 HindIII A'AGCT_T Cuts at: 0 265 1431 Size: 265 1166 KasI G'GCGC_C Cuts at: 0 1253 1431 Size: 1253 178 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 8 1431 Size: 8 1423 MscI TGG'CCA Cuts at: 0 730 925 1075 1431 Size: 730 195 150 356 Fragments arranged by size: 730 356 195 150 MslI CAynn'nnrTG Cuts at: 0 64 583 607 823 1198 1431 Size: 64 519 24 216 375 233 Fragments arranged by size: 519 375 233 216 64 24 MspA1I CmG'CkG Cuts at: 0 198 516 1286 1431 Size: 198 318 770 145 Fragments arranged by size: 770 318 198 145 NarI GG'CG_CC Cuts at: 0 1254 1431 Size: 1254 177 NcoI C'CATG_G Cuts at: 0 369 1431 Size: 369 1062 PasI CC'CwG_GG Cuts at: 0 951 1144 1431 Size: 951 193 287 Fragments arranged by size: 951 287 193 PpuMI rG'GwC_Cy Cuts at: 0 669 885 1314 1431 Size: 669 216 429 117 Fragments arranged by size: 669 429 216 117 PstI C_TGCA'G Cuts at: 0 358 1431 Size: 358 1073 PvuII CAG'CTG Cuts at: 0 516 1286 1431 Size: 516 770 145 Fragments arranged by size: 770 516 145 SacI G_AGCT'C Cuts at: 0 173 230 1396 1431 Size: 173 57 1166 35 Fragments arranged by size: 1166 173 57 35 SapI GCTCTTCn'nnn_ Cuts at: 0 235 1431 Size: 235 1196 ScaI AGT'ACT Cuts at: 0 319 1431 Size: 319 1112 SexAI A'CCwGG_T Cuts at: 0 833 1431 Size: 833 598 SfcI C'TryA_G Cuts at: 0 354 360 1431 Size: 354 6 1071 Fragments arranged by size: 1071 354 6 SfoI GGC'GCC Cuts at: 0 1255 1431 Size: 1255 176 SmlI C'TyrA_G Cuts at: 0 757 1267 1431 Size: 757 510 164 Fragments arranged by size: 757 510 164 StyI C'CwwG_G Cuts at: 0 369 673 1431 Size: 369 304 758 Fragments arranged by size: 758 369 304 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 1311 1431 Size: 1311 120 TatI w'GTAC_w Cuts at: 0 317 1431 Size: 317 1114 Tth111I GACn'n_nGTC Cuts at: 0 190 1431 Size: 190 1241 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 658 738 1029 1431 Size: 658 80 291 402 Fragments arranged by size: 658 402 291 80 ZraI GAC'GTC Cuts at: 0 192 1431 Size: 192 1239 Enzymes that do cut: AatII AcuI AflIII AhdI AleI AloI AlwNI AvaI AvrII BanI BanII BbeI BbsI BlpI BmgBI BmrI BpmI Bpu10I BpuEI BsaAI BsaBI BsaHI BsaXI BseRI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BsrBI BsrDI BsrFI BssSI BstAPI BstBI BstXI BstYI Bsu36I BtgI BtgZI DraI DraIII EaeI EarI EcoICRI Eco57MI EcoO109I FspI HaeII Hin4I HindIII KasI MmeI MscI MslI MspA1I NarI NcoI PasI PpuMI PstI PvuII SacI SapI ScaI SexAI SfcI SfoI SmlI StyI TaqII TatI Tth111I XcmI ZraI Enzymes that do not cut: AarI AccI Acc65I AclI AfeI AflII AgeI AlfI ApaI ApaLI ApoI AscI AseI AsiSI BaeI BamHI BbvCI BcgI BciVI BclI BfrBI BglI BglII Bme1580I BmtI BplI BsaI BsaWI BseYI BsgI BsiWI BspEI BspHI BspMI BsrGI BssHII BstEII BstZ17I BtsI ClaI CspCI DrdI EagI EciI EcoNI EcoRI EcoRV FalI FseI FspAI HincII HpaI KpnI MfeI MluI NaeI NdeI NgoMIV NheI NotI NruI NsiI NspI PacI PciI PflMI PfoI PmeI PmlI PpiI PshAI PsiI PspOMI PspXI PsrI PvuI RsrII SacII SalI SanDI SbfI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI SspI StuI SwaI TstI XbaI XhoI XmaI XmnI