(Linear) (Six-base) MAPSORT of: KIAA1435.seq Check: 395 from: 1 to: 1230 KIAA1435.orf With 182 enzymes: SgfI * July 31, 2008 09:34 .. AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 314 348 565 697 736 1230 Size: 314 34 217 132 39 494 Fragments arranged by size: 494 314 217 132 39 34 AfeI AGC'GCT Cuts at: 0 985 1230 Size: 985 245 AflIII A'CryG_T Cuts at: 0 560 562 1112 1230 Size: 560 2 550 118 Fragments arranged by size: 560 550 118 2 AlwNI CAG_nnn'CTG Cuts at: 0 741 1230 Size: 741 489 ApaLI G'TGCA_C Cuts at: 0 423 1230 Size: 423 807 ApoI r'AATT_y Cuts at: 0 280 1230 Size: 280 950 AvaI C'yCGr_G Cuts at: 0 445 1230 Size: 445 785 BanI G'GyrC_C Cuts at: 0 65 1230 Size: 65 1165 BclI T'GATC_A Cuts at: 0 116 386 1230 Size: 116 270 844 Fragments arranged by size: 844 270 116 BglI GCCn_nnn'nGGC Cuts at: 0 82 1230 Size: 82 1148 BglII A'GATC_T Cuts at: 0 1172 1230 Size: 1172 58 BlpI GC'TnA_GC Cuts at: 0 49 1230 Size: 49 1181 Bme1580I G_kGCm'C Cuts at: 0 68 427 1230 Size: 68 359 803 Fragments arranged by size: 803 359 68 BmgBI CAC'GTC Cuts at: 0 464 1230 Size: 464 766 BmrI ACTGGGnnnn_n' Cuts at: 0 991 1223 1230 Size: 991 232 7 Fragments arranged by size: 991 232 7 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 3 1230 Size: 3 1227 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 972 1230 Size: 972 258 BsaAI yAC'GTr Cuts at: 0 563 1230 Size: 563 667 BsaBI GATnn'nnATC Cuts at: 0 1061 1230 Size: 1061 169 BsaHI Gr'CG_yC Cuts at: 0 74 1230 Size: 74 1156 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 824 1230 Size: 824 406 BseYI C'CCAG_C Cuts at: 0 181 330 918 1230 Size: 181 149 588 312 Fragments arranged by size: 588 312 181 149 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 754 993 1230 Size: 754 239 237 Fragments arranged by size: 754 239 237 BsiEI CG_ry'CG Cuts at: 0 8 86 1161 1230 Size: 8 78 1075 69 Fragments arranged by size: 1075 78 69 8 BsiHKAI G_wGCw'C Cuts at: 0 427 1230 Size: 427 803 BsmBI CGTCTCn'nnnn_ Cuts at: 0 777 1230 Size: 777 453 Bsp1286I G_dGCh'C Cuts at: 0 68 427 1230 Size: 68 359 803 Fragments arranged by size: 803 359 68 BspHI T'CATG_A Cuts at: 0 231 723 1086 1230 Size: 231 492 363 144 Fragments arranged by size: 492 363 231 144 BsrBI CCG'CTC Cuts at: 0 434 1230 Size: 434 796 BsrDI GCAATG_nn' Cuts at: 0 1124 1230 Size: 1124 106 BsrFI r'CCGG_y Cuts at: 0 394 1230 Size: 394 836 BstAPI GCAn_nnn'nTGC Cuts at: 0 947 1230 Size: 947 283 BstEII G'GTnAC_C Cuts at: 0 1143 1230 Size: 1143 87 BstXI CCAn_nnnn'nTGG Cuts at: 0 265 884 918 1230 Size: 265 619 34 312 Fragments arranged by size: 619 312 265 34 BstYI r'GATC_y Cuts at: 0 1172 1230 Size: 1172 58 BtgI C'CryG_G Cuts at: 0 1118 1230 Size: 1118 112 BtsI GCAGTG_nn' Cuts at: 0 806 936 1230 Size: 806 130 294 Fragments arranged by size: 806 294 130 DraIII CAC_nnn'GTG Cuts at: 0 380 1230 Size: 380 850 EaeI y'GGCC_r Cuts at: 0 5 83 122 371 396 1230 Size: 5 78 39 249 25 834 Fragments arranged by size: 834 249 78 39 25 5 EagI C'GGCC_G Cuts at: 0 5 83 1230 Size: 5 78 1147 Fragments arranged by size: 1147 78 5 EarI CTCTTCn'nnn_ Cuts at: 0 646 821 1230 Size: 646 175 409 Fragments arranged by size: 646 409 175 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 806 1230 Size: 806 424 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 3 314 348 565 697 736 1230 Size: 3 311 34 217 132 39 494 Fragments arranged by size: 494 311 217 132 39 34 3 EcoO109I rG'GnC_Cy Cuts at: 0 621 1230 Size: 621 609 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 872 1230 Size: 872 358 HaeII r_GCGC'y Cuts at: 0 987 1230 Size: 987 243 HindIII A'AGCT_T Cuts at: 0 547 1230 Size: 547 683 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 824 1230 Size: 824 406 MscI TGG'CCA Cuts at: 0 373 1230 Size: 373 857 MslI CAynn'nnrTG Cuts at: 0 670 1117 1230 Size: 670 447 113 Fragments arranged by size: 670 447 113 MspA1I CmG'CkG Cuts at: 0 633 1230 Size: 633 597 NcoI C'CATG_G Cuts at: 0 1118 1230 Size: 1118 112 NspI r_CATG'y Cuts at: 0 444 1116 1230 Size: 444 672 114 Fragments arranged by size: 672 444 114 PciI A'CATG_T Cuts at: 0 1112 1230 Size: 1112 118 PflMI CCAn_nnn'nTGG Cuts at: 0 198 380 1230 Size: 198 182 850 Fragments arranged by size: 850 198 182 PmlI CAC'GTG Cuts at: 0 563 1230 Size: 563 667 PpuMI rG'GwC_Cy Cuts at: 0 621 1230 Size: 621 609 PshAI GACnn'nnGTC Cuts at: 0 167 1230 Size: 167 1063 PstI C_TGCA'G Cuts at: 0 943 1204 1230 Size: 943 261 26 Fragments arranged by size: 943 261 26 SanDI GG'GwC_CC Cuts at: 0 621 1230 Size: 621 609 SfcI C'TryA_G Cuts at: 0 939 1200 1230 Size: 939 261 30 Fragments arranged by size: 939 261 30 SmlI C'TyrA_G Cuts at: 0 987 1230 Size: 987 243 StyI C'CwwG_G Cuts at: 0 101 1118 1230 Size: 101 1017 112 Fragments arranged by size: 1017 112 101 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 372 1171 1230 Size: 372 799 59 Fragments arranged by size: 799 372 59 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 785 817 1127 1159 1230 Size: 785 32 310 32 71 Fragments arranged by size: 785 310 71 32 32 Tth111I GACn'n_nGTC Cuts at: 0 76 1230 Size: 76 1154 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 1137 1230 Size: 1137 93 Enzymes that do cut: AcuI AfeI AflIII AlwNI ApaLI ApoI AvaI BanI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BpmI BpuEI BsaAI BsaBI BsaHI BseRI BseYI BsgI BsiEI BsiHKAI BsmBI Bsp1286I BspHI BsrBI BsrDI BsrFI BstAPI BstEII BstXI BstYI BtgI BtsI DraIII EaeI EagI EarI EciI Eco57MI EcoO109I FalI HaeII HindIII MmeI MscI MslI MspA1I NcoI NspI PciI PflMI PmlI PpuMI PshAI PstI SanDI SfcI SmlI StyI TaqII TstI Tth111I XcmI Enzymes that do not cut: AarI AatII AccI Acc65I AclI AflII AgeI AhdI AleI AlfI AloI ApaI AscI AseI AsiSI AvrII BaeI BamHI BanII BbeI BbsI BbvCI BcgI BciVI BfrBI BmtI BplI Bpu10I BsaI BsaWI BsaXI BsiWI BsmI BspEI BspMI BsrGI BssHII BssSI BstBI BstZ17I Bsu36I BtgZI ClaI CspCI DraI DrdI EcoICRI EcoNI EcoRI EcoRV FseI FspI FspAI Hin4I HincII HpaI KasI KpnI MfeI MluI NaeI NarI NdeI NgoMIV NheI NotI NruI NsiI PacI PasI PfoI PmeI PpiI PsiI PspOMI PspXI PsrI PvuI PvuII RsrII SacI SacII SalI SapI SbfI ScaI SexAI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI SspI StuI SwaI TatI XbaI XhoI XmaI XmnI ZraI