(Linear) (Six-base) MAPSORT of: KIAA1711.seq Check: 6201 from: 1 to: 3093 KIAA1711.orf With 182 enzymes: SgfI * October 24, 2006 15:17 .. AatII G_ACGT'C Cuts at: 0 1790 3093 Size: 1790 1303 AccI GT'mk_AC Cuts at: 0 830 3093 Size: 830 2263 AclI AA'CG_TT Cuts at: 0 2961 3093 Size: 2961 132 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1 233 1307 1565 2636 3008 3093 Size: 1 232 1074 258 1071 372 85 Fragments arranged by size: 1074 1071 372 258 232 85 1 AflII C'TTAA_G Cuts at: 0 2949 3093 Size: 2949 144 AflIII A'CryG_T Cuts at: 0 550 940 1347 2367 3093 Size: 550 390 407 1020 726 Fragments arranged by size: 1020 726 550 407 390 AleI CACnn'nnGTG Cuts at: 0 758 3093 Size: 758 2335 AlwNI CAG_nnn'CTG Cuts at: 0 2305 2881 3093 Size: 2305 576 212 Fragments arranged by size: 2305 576 212 ApaLI G'TGCA_C Cuts at: 0 2844 3093 Size: 2844 249 ApoI r'AATT_y Cuts at: 0 93 301 1419 1453 2350 2499 2651 2786 Size: 93 208 1118 34 897 149 152 135 Cuts at: 2786 3093 Size: 307 Fragments arranged by size: 1118 897 307 208 152 149 135 93 34 AseI AT'TA_AT Cuts at: 0 223 1802 3093 Size: 223 1579 1291 Fragments arranged by size: 1579 1291 223 AvaI C'yCGr_G Cuts at: 0 353 3093 Size: 353 2740 AvrII C'CTAG_G Cuts at: 0 1186 3093 Size: 1186 1907 BanI G'GyrC_C Cuts at: 0 183 1917 3093 Size: 183 1734 1176 Fragments arranged by size: 1734 1176 183 BanII G_rGCy'C Cuts at: 0 1362 3093 Size: 1362 1731 BbsI GAAGACnn'nnnn_ Cuts at: 0 1085 1331 1553 3093 Size: 1085 246 222 1540 Fragments arranged by size: 1540 1085 246 222 BbvCI CC'TCA_GC Cuts at: 0 1820 3066 3093 Size: 1820 1246 27 Fragments arranged by size: 1820 1246 27 BciVI GTATCCnnnnn_n' Cuts at: 0 796 1633 3093 Size: 796 837 1460 Fragments arranged by size: 1460 837 796 BclI T'GATC_A Cuts at: 0 903 2250 3093 Size: 903 1347 843 Fragments arranged by size: 1347 903 843 BfrBI ATG'CAT Cuts at: 0 2095 2122 3093 Size: 2095 27 971 Fragments arranged by size: 2095 971 27 BglI GCCn_nnn'nGGC Cuts at: 0 1742 3093 Size: 1742 1351 Bme1580I G_kGCm'C Cuts at: 0 2848 2990 3093 Size: 2848 142 103 Fragments arranged by size: 2848 142 103 BmgBI CAC'GTC Cuts at: 0 1329 3093 Size: 1329 1764 BmrI ACTGGGnnnn_n' Cuts at: 0 1268 3093 Size: 1268 1825 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 2134 3093 Size: 2134 959 Bpu10I CC'TnA_GC Cuts at: 0 1820 3066 3093 Size: 1820 1246 27 Fragments arranged by size: 1820 1246 27 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1375 3093 Size: 1375 1718 BsaAI yAC'GTr Cuts at: 0 943 3093 Size: 943 2150 BsaBI GATnn'nnATC Cuts at: 0 2459 3093 Size: 2459 634 BsaHI Gr'CG_yC Cuts at: 0 1277 1787 3093 Size: 1277 510 1306 Fragments arranged by size: 1306 1277 510 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 908 938 2376 2406 3093 Size: 908 30 1438 30 687 Fragments arranged by size: 1438 908 687 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 1162 1165 1183 1186 1737 2709 3093 Size: 1162 3 18 3 551 972 384 Fragments arranged by size: 1162 972 551 384 18 3 3 BseYI C'CCAG_C Cuts at: 0 3080 3093 Size: 3080 13 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1521 3093 Size: 1521 1572 BsiHKAI G_wGCw'C Cuts at: 0 964 1362 2848 3093 Size: 964 398 1486 245 Fragments arranged by size: 1486 964 398 245 BsmI GAATG_Cn' Cuts at: 0 546 3007 3093 Size: 546 2461 86 Fragments arranged by size: 2461 546 86 Bsp1286I G_dGCh'C Cuts at: 0 964 1362 2848 2990 3093 Size: 964 398 1486 142 103 Fragments arranged by size: 1486 964 398 142 103 BspHI T'CATG_A Cuts at: 0 2675 3093 Size: 2675 418 BsrDI GCAATG_nn' Cuts at: 0 383 3093 Size: 383 2710 BsrGI T'GTAC_A Cuts at: 0 597 3093 Size: 597 2496 BssSI C'ACGA_G Cuts at: 0 1670 3093 Size: 1670 1423 BstAPI GCAn_nnn'nTGC Cuts at: 0 1508 3093 Size: 1508 1585 BstXI CCAn_nnnn'nTGG Cuts at: 0 646 3093 Size: 646 2447 BstYI r'GATC_y Cuts at: 0 396 2445 2900 3093 Size: 396 2049 455 193 Fragments arranged by size: 2049 455 396 193 BstZ17I GTA'TAC Cuts at: 0 831 3093 Size: 831 2262 Bsu36I CC'TnA_GG Cuts at: 0 2905 3093 Size: 2905 188 DraI TTT'AAA Cuts at: 0 1601 2361 3015 3093 Size: 1601 760 654 78 Fragments arranged by size: 1601 760 654 78 DrdI GACnn_nn'nnGTC Cuts at: 0 1786 3093 Size: 1786 1307 EaeI y'GGCC_r Cuts at: 0 2 3093 Size: 2 3091 EarI CTCTTCn'nnn_ Cuts at: 0 173 503 1139 1160 1283 2526 2923 2973 Size: 173 330 636 21 123 1243 397 50 Cuts at: 2973 3027 3067 3093 Size: 54 40 26 Fragments arranged by size: 1243 636 397 330 173 123 54 50 40 26 21 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 2010 3093 Size: 2010 1083 EcoICRI GAG'CTC Cuts at: 0 1360 3093 Size: 1360 1733 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1 233 1307 1565 2134 2636 3008 3093 Size: 1 232 1074 258 569 502 372 85 Fragments arranged by size: 1074 569 502 372 258 232 85 1 EcoO109I rG'GnC_Cy Cuts at: 0 643 3077 3093 Size: 643 2434 16 Fragments arranged by size: 2434 643 16 EcoRI G'AATT_C Cuts at: 0 1453 3093 Size: 1453 1640 EcoRV GAT'ATC Cuts at: 0 1965 3093 Size: 1965 1128 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 52 3093 Size: 52 3041 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 388 420 787 819 888 920 1267 1299 Size: 388 32 367 32 69 32 347 32 Cuts at: 1299 1935 1967 2376 2408 2560 2592 3093 Size: 636 32 409 32 152 32 501 Fragments arranged by size: 636 501 409 388 367 347 152 69 32 32 32 32 32 32 32 HincII GTy'rAC Cuts at: 0 442 801 896 2612 2819 3093 Size: 442 359 95 1716 207 274 Fragments arranged by size: 1716 442 359 274 207 95 HpaI GTT'AAC Cuts at: 0 801 2612 3093 Size: 801 1811 481 Fragments arranged by size: 1811 801 481 MfeI C'AATT_G Cuts at: 0 1922 3093 Size: 1922 1171 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 852 1672 3093 Size: 852 820 1421 Fragments arranged by size: 1421 852 820 MscI TGG'CCA Cuts at: 0 4 3093 Size: 4 3089 MslI CAynn'nnrTG Cuts at: 0 593 758 3093 Size: 593 165 2335 Fragments arranged by size: 2335 593 165 MspA1I CmG'CkG Cuts at: 0 664 2878 3093 Size: 664 2214 215 Fragments arranged by size: 2214 664 215 NsiI A_TGCA'T Cuts at: 0 2097 2124 3093 Size: 2097 27 969 Fragments arranged by size: 2097 969 27 NspI r_CATG'y Cuts at: 0 554 925 1351 2371 3093 Size: 554 371 426 1020 722 Fragments arranged by size: 1020 722 554 426 371 PciI A'CATG_T Cuts at: 0 550 1347 2367 3093 Size: 550 797 1020 726 Fragments arranged by size: 1020 797 726 550 PfoI T'CCnGG_A Cuts at: 0 1719 3093 Size: 1719 1374 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1175 1207 3093 Size: 1175 32 1886 Fragments arranged by size: 1886 1175 32 PpuMI rG'GwC_Cy Cuts at: 0 643 3077 3093 Size: 643 2434 16 Fragments arranged by size: 2434 643 16 PshAI GACnn'nnGTC Cuts at: 0 216 3093 Size: 216 2877 PsiI TTA'TAA Cuts at: 0 1634 2506 3093 Size: 1634 872 587 Fragments arranged by size: 1634 872 587 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 0 2728 2760 3093 Size: 2728 32 333 Fragments arranged by size: 2728 333 32 PstI C_TGCA'G Cuts at: 0 156 3093 Size: 156 2937 PvuII CAG'CTG Cuts at: 0 664 2878 3093 Size: 664 2214 215 Fragments arranged by size: 2214 664 215 SacI G_AGCT'C Cuts at: 0 1362 3093 Size: 1362 1731 SapI GCTCTTCn'nnn_ Cuts at: 0 503 3027 3093 Size: 503 2524 66 Fragments arranged by size: 2524 503 66 SfcI C'TryA_G Cuts at: 0 152 3093 Size: 152 2941 SmlI C'TyrA_G Cuts at: 0 1390 2949 3093 Size: 1390 1559 144 Fragments arranged by size: 1559 1390 144 SspI AAT'ATT Cuts at: 0 227 2219 2238 3093 Size: 227 1992 19 855 Fragments arranged by size: 1992 855 227 19 StyI C'CwwG_G Cuts at: 0 639 1186 3093 Size: 639 547 1907 Fragments arranged by size: 1907 639 547 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 261 1605 3093 Size: 261 1344 1488 Fragments arranged by size: 1488 1344 261 TatI w'GTAC_w Cuts at: 0 597 1054 1107 2798 3093 Size: 597 457 53 1691 295 Fragments arranged by size: 1691 597 457 295 53 Tth111I GACn'n_nGTC Cuts at: 0 1834 3093 Size: 1834 1259 XbaI T'CTAG_A Cuts at: 0 2098 3093 Size: 2098 995 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 1945 2921 3093 Size: 1945 976 172 Fragments arranged by size: 1945 976 172 XmnI GAAnn'nnTTC Cuts at: 0 1130 1679 1875 1933 3093 Size: 1130 549 196 58 1160 Fragments arranged by size: 1160 1130 549 196 58 ZraI GAC'GTC Cuts at: 0 1788 3093 Size: 1788 1305 Enzymes that do cut: AatII AccI AclI AcuI AflII AflIII AleI AlwNI ApaLI ApoI AseI AvaI AvrII BanI BanII BbsI BbvCI BciVI BclI BfrBI BglI Bme1580I BmgBI BmrI BpmI Bpu10I BpuEI BsaAI BsaBI BsaHI BsaXI BseRI BseYI BsgI BsiHKAI BsmI Bsp1286I BspHI BsrDI BsrGI BssSI BstAPI BstXI BstYI BstZ17I Bsu36I DraI DrdI EaeI EarI EciI EcoICRI Eco57MI EcoO109I EcoRI EcoRV FalI Hin4I HincII HpaI MfeI MmeI MscI MslI MspA1I NsiI NspI PciI PfoI PpiI PpuMI PshAI PsiI PsrI PstI PvuII SacI SapI SfcI SmlI SspI StyI TaqII TatI Tth111I XbaI XcmI XmnI ZraI Enzymes that do not cut: AarI Acc65I AfeI AgeI AhdI AlfI AloI ApaI AscI AsiSI BaeI BamHI BbeI BcgI BglII BlpI BmtI BplI BsaI BsaWI BsiEI BsiWI BsmBI BspEI BspMI BsrBI BsrFI BssHII BstBI BstEII BtgI BtgZI BtsI ClaI CspCI DraIII EagI EcoNI FseI FspI FspAI HaeII HindIII KasI KpnI MluI NaeI NarI NcoI NdeI NgoMIV NheI NotI NruI PacI PasI PflMI PmeI PmlI PspOMI PspXI PvuI RsrII SacII SalI SanDI SbfI ScaI SexAI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI StuI SwaI TstI XhoI XmaI