(Linear) (Six-base) MAPSORT of: KIAA1969.seq Check: 2646 from: 1 to: 1728 KIAA1969.orf With 182 enzymes: SgfI * October 24, 2006 15:18 .. AgeI A'CCGG_T Cuts at: 0 893 1313 1728 Size: 893 420 415 Fragments arranged by size: 893 420 415 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 63 1728 Size: 63 1665 ApaLI G'TGCA_C Cuts at: 0 466 1728 Size: 466 1262 ApoI r'AATT_y Cuts at: 0 127 171 420 559 671 687 755 1175 Size: 127 44 249 139 112 16 68 420 Cuts at: 1175 1427 1595 1728 Size: 252 168 133 Fragments arranged by size: 420 252 249 168 139 133 127 112 68 44 16 BanII G_rGCy'C Cuts at: 0 278 1728 Size: 278 1450 BbsI GAAGACnn'nnnn_ Cuts at: 0 207 974 1728 Size: 207 767 754 Fragments arranged by size: 767 754 207 BciVI GTATCCnnnnn_n' Cuts at: 0 35 1728 Size: 35 1693 BlpI GC'TnA_GC Cuts at: 0 164 1728 Size: 164 1564 Bme1580I G_kGCm'C Cuts at: 0 470 1728 Size: 470 1258 BmrI ACTGGGnnnn_n' Cuts at: 0 241 857 1728 Size: 241 616 871 Fragments arranged by size: 871 616 241 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1712 1728 Size: 1712 16 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 157 280 785 953 1037 1121 1205 1289 Size: 157 123 505 168 84 84 84 84 Cuts at: 1289 1373 1457 1707 1728 Size: 84 84 250 21 Fragments arranged by size: 505 250 168 157 123 84 84 84 84 84 84 21 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 16 1728 Size: 16 1712 BsaWI w'CCGG_w Cuts at: 0 893 1313 1728 Size: 893 420 415 Fragments arranged by size: 893 420 415 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 154 1728 Size: 154 1574 BseYI C'CCAG_C Cuts at: 0 315 1728 Size: 315 1413 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1316 1728 Size: 1316 412 BsiHKAI G_wGCw'C Cuts at: 0 470 1728 Size: 470 1258 BsmI GAATG_Cn' Cuts at: 0 154 1728 Size: 154 1574 Bsp1286I G_dGCh'C Cuts at: 0 278 470 1728 Size: 278 192 1258 Fragments arranged by size: 1258 278 192 BsrFI r'CCGG_y Cuts at: 0 893 1313 1728 Size: 893 420 415 Fragments arranged by size: 893 420 415 ClaI AT'CG_AT Cuts at: 0 1062 1728 Size: 1062 666 DraI TTT'AAA Cuts at: 0 566 723 1728 Size: 566 157 1005 Fragments arranged by size: 1005 566 157 EaeI y'GGCC_r Cuts at: 0 119 349 1728 Size: 119 230 1379 Fragments arranged by size: 1379 230 119 EarI CTCTTCn'nnn_ Cuts at: 0 283 1728 Size: 283 1445 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 157 280 785 953 1037 1121 1205 1289 Size: 157 123 505 168 84 84 84 84 Cuts at: 1289 1373 1457 1707 1728 Size: 84 84 250 21 Fragments arranged by size: 505 250 168 157 123 84 84 84 84 84 84 21 EcoRI G'AATT_C Cuts at: 0 127 671 687 755 1175 1427 1728 Size: 127 544 16 68 420 252 301 Fragments arranged by size: 544 420 301 252 127 68 16 HincII GTy'rAC Cuts at: 0 661 1728 Size: 661 1067 HindIII A'AGCT_T Cuts at: 0 716 800 968 1052 1304 1388 1472 1728 Size: 716 84 168 84 252 84 84 256 Fragments arranged by size: 716 256 252 168 84 84 84 84 MscI TGG'CCA Cuts at: 0 121 351 1728 Size: 121 230 1377 Fragments arranged by size: 1377 230 121 MslI CAynn'nnrTG Cuts at: 0 864 1728 Size: 864 864 NspI r_CATG'y Cuts at: 0 645 1728 Size: 645 1083 PasI CC'CwG_GG Cuts at: 0 52 1728 Size: 52 1676 PsiI TTA'TAA Cuts at: 0 482 1728 Size: 482 1246 SexAI A'CCwGG_T Cuts at: 0 209 1728 Size: 209 1519 SmlI C'TyrA_G Cuts at: 0 31 1728 Size: 31 1697 SphI G_CATG'C Cuts at: 0 645 1728 Size: 645 1083 SspI AAT'ATT Cuts at: 0 524 1728 Size: 524 1204 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 211 1728 Size: 211 1517 TatI w'GTAC_w Cuts at: 0 994 1728 Size: 994 734 Tth111I GACn'n_nGTC Cuts at: 0 247 1728 Size: 247 1481 XmnI GAAnn'nnTTC Cuts at: 0 607 775 1728 Size: 607 168 953 Fragments arranged by size: 953 607 168 Enzymes that do cut: AgeI AlfI ApaLI ApoI BanII BbsI BciVI BlpI Bme1580I BmrI BplI BpmI BpuEI BsaWI BseRI BseYI BsgI BsiHKAI BsmI Bsp1286I BsrFI ClaI DraI EaeI EarI Eco57MI EcoRI HincII HindIII MscI MslI NspI PasI PsiI SexAI SmlI SphI SspI TaqII TatI Tth111I XmnI Enzymes that do not cut: AarI AatII AccI Acc65I AclI AcuI AfeI AflII AflIII AhdI AleI AloI AlwNI ApaI AscI AseI AsiSI AvaI AvrII BaeI BamHI BanI BbeI BbvCI BcgI BclI BfrBI BglI BglII BmgBI BmtI Bpu10I BsaI BsaAI BsaBI BsaHI BsaXI BsiEI BsiWI BsmBI BspEI BspHI BspMI BsrBI BsrDI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI BstZ17I Bsu36I BtgI BtgZI BtsI CspCI DraIII DrdI EagI EciI EcoICRI EcoNI EcoO109I EcoRV FalI FseI FspI FspAI HaeII Hin4I HpaI KasI KpnI MfeI MluI MmeI MspA1I NaeI NarI NcoI NdeI NgoMIV NheI NotI NruI NsiI PacI PciI PflMI PfoI PmeI PmlI PpiI PpuMI PshAI PspOMI PspXI PsrI PstI PvuI PvuII RsrII SacI SacII SalI SanDI SapI SbfI ScaI SfcI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SrfI StuI StyI SwaI TstI XbaI XcmI XhoI XmaI ZraI