(Linear) (Six-base) MAPSORT of: KIBB1338.seq Check: 4209 from: 1 to: 1815 KIBB1338.orf With 182 enzymes: SgfI * July 18, 2007 13:36 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 375 1815 Size: 375 1440 AatII G_ACGT'C Cuts at: 0 619 1815 Size: 619 1196 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 486 1815 Size: 486 1329 AfeI AGC'GCT Cuts at: 0 1512 1815 Size: 1512 303 AflIII A'CryG_T Cuts at: 0 218 1815 Size: 218 1597 AhdI GACnn_n'nnGTC Cuts at: 0 954 1815 Size: 954 861 AlwNI CAG_nnn'CTG Cuts at: 0 1242 1746 1815 Size: 1242 504 69 Fragments arranged by size: 1242 504 69 ApaI G_GGCC'C Cuts at: 0 103 1067 1089 1815 Size: 103 964 22 726 Fragments arranged by size: 964 726 103 22 ApaLI G'TGCA_C Cuts at: 0 40 1815 Size: 40 1775 AvaI C'yCGr_G Cuts at: 0 536 1388 1405 1815 Size: 536 852 17 410 Fragments arranged by size: 852 536 410 17 BamHI G'GATC_C Cuts at: 0 925 1815 Size: 925 890 BanI G'GyrC_C Cuts at: 0 20 1171 1464 1620 1798 1815 Size: 20 1151 293 156 178 17 Fragments arranged by size: 1151 293 178 156 20 17 BanII G_rGCy'C Cuts at: 0 103 265 544 1034 1067 1089 1633 1765 Size: 103 162 279 490 33 22 544 132 Cuts at: 1765 1815 Size: 50 Fragments arranged by size: 544 490 279 162 132 103 50 33 22 BbeI G_GCGC'C Cuts at: 0 24 1624 1815 Size: 24 1600 191 Fragments arranged by size: 1600 191 24 BbsI GAAGACnn'nnnn_ Cuts at: 0 1704 1815 Size: 1704 111 BbvCI CC'TCA_GC Cuts at: 0 1425 1815 Size: 1425 390 BglI GCCn_nnn'nGGC Cuts at: 0 515 1062 1604 1815 Size: 515 547 542 211 Fragments arranged by size: 547 542 515 211 BlpI GC'TnA_GC Cuts at: 0 1666 1764 1815 Size: 1666 98 51 Fragments arranged by size: 1666 98 51 Bme1580I G_kGCm'C Cuts at: 0 44 103 1067 1089 1815 Size: 44 59 964 22 726 Fragments arranged by size: 964 726 59 44 22 BmrI ACTGGGnnnn_n' Cuts at: 0 1042 1130 1295 1815 Size: 1042 88 165 520 Fragments arranged by size: 1042 520 165 88 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 487 616 1168 1187 1252 1815 Size: 487 129 552 19 65 563 Fragments arranged by size: 563 552 487 129 65 19 Bpu10I CC'TnA_GC Cuts at: 0 1425 1815 Size: 1425 390 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 238 301 385 427 1815 Size: 238 63 84 42 1388 Fragments arranged by size: 1388 238 84 63 42 BsaI GGTCTCn'nnnn_ Cuts at: 0 962 1144 1210 1283 1510 1815 Size: 962 182 66 73 227 305 Fragments arranged by size: 962 305 227 182 73 66 BsaAI yAC'GTr Cuts at: 0 219 1815 Size: 219 1596 BsaHI Gr'CG_yC Cuts at: 0 21 359 616 1621 1815 Size: 21 338 257 1005 194 Fragments arranged by size: 1005 338 257 194 21 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 34 64 517 547 577 673 703 1815 Size: 34 30 453 30 30 96 30 1112 Fragments arranged by size: 1112 453 96 34 30 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 424 552 555 682 799 802 1011 1014 Size: 424 128 3 127 117 3 209 3 Cuts at: 1014 1815 Size: 801 Fragments arranged by size: 801 424 209 128 127 117 3 3 3 BseYI C'CCAG_C Cuts at: 0 495 1060 1114 1258 1294 1370 1593 1815 Size: 495 565 54 144 36 76 223 222 Fragments arranged by size: 565 495 223 222 144 76 54 36 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 746 1815 Size: 746 1069 BsiEI CG_ry'CG Cuts at: 0 339 1815 Size: 339 1476 BsiHKAI G_wGCw'C Cuts at: 0 44 1765 1815 Size: 44 1721 50 Fragments arranged by size: 1721 50 44 BsmBI CGTCTCn'nnnn_ Cuts at: 0 1540 1815 Size: 1540 275 Bsp1286I G_dGCh'C Cuts at: 0 44 103 265 544 1034 1067 1089 1633 Size: 44 59 162 279 490 33 22 544 Cuts at: 1633 1765 1815 Size: 132 50 Fragments arranged by size: 544 490 279 162 132 59 50 44 33 22 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 257 375 852 1815 Size: 257 118 477 963 Fragments arranged by size: 963 477 257 118 BsrBI CCG'CTC Cuts at: 0 270 414 533 1665 1815 Size: 270 144 119 1132 150 Fragments arranged by size: 1132 270 150 144 119 BsrDI GCAATG_nn' Cuts at: 0 93 235 1815 Size: 93 142 1580 Fragments arranged by size: 1580 142 93 BsrFI r'CCGG_y Cuts at: 0 1579 1587 1795 1815 Size: 1579 8 208 20 Fragments arranged by size: 1579 208 20 8 BsrGI T'GTAC_A Cuts at: 0 221 1815 Size: 221 1594 BstAPI GCAn_nnn'nTGC Cuts at: 0 1242 1746 1815 Size: 1242 504 69 Fragments arranged by size: 1242 504 69 BstYI r'GATC_y Cuts at: 0 925 1002 1815 Size: 925 77 813 Fragments arranged by size: 925 813 77 Bsu36I CC'TnA_GG Cuts at: 0 969 1815 Size: 969 846 BtgI C'CryG_G Cuts at: 0 713 734 883 1774 1815 Size: 713 21 149 891 41 Fragments arranged by size: 891 713 149 41 21 BtsI GCAGTG_nn' Cuts at: 0 492 867 1815 Size: 492 375 948 Fragments arranged by size: 948 492 375 DraIII CAC_nnn'GTG Cuts at: 0 1168 1815 Size: 1168 647 DrdI GACnn_nn'nnGTC Cuts at: 0 358 1407 1456 1815 Size: 358 1049 49 359 Fragments arranged by size: 1049 359 358 49 EaeI y'GGCC_r Cuts at: 0 716 1815 Size: 716 1099 EarI CTCTTCn'nnn_ Cuts at: 0 573 620 767 1815 Size: 573 47 147 1048 Fragments arranged by size: 1048 573 147 47 EcoICRI GAG'CTC Cuts at: 0 1763 1815 Size: 1763 52 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 486 487 616 1168 1187 1252 1815 Size: 486 1 129 552 19 65 563 Fragments arranged by size: 563 552 486 129 65 19 1 EcoNI CCTnn'n_nnAGG Cuts at: 0 400 598 1038 1815 Size: 400 198 440 777 Fragments arranged by size: 777 440 400 198 EcoO109I rG'GnC_Cy Cuts at: 0 99 100 689 937 1043 1064 1086 1239 Size: 99 1 589 248 106 21 22 153 Cuts at: 1239 1420 1815 Size: 181 395 Fragments arranged by size: 589 395 248 181 153 106 99 22 21 1 FspI TGC'GCA Cuts at: 0 1576 1815 Size: 1576 239 FspAI rTGC'GCAy Cuts at: 0 1576 1815 Size: 1576 239 HaeII r_GCGC'y Cuts at: 0 24 1514 1594 1624 1649 1815 Size: 24 1490 80 30 25 166 Fragments arranged by size: 1490 166 80 30 25 24 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 673 705 940 972 1815 Size: 673 32 235 32 843 Fragments arranged by size: 843 673 235 32 32 HincII GTy'rAC Cuts at: 0 363 1443 1815 Size: 363 1080 372 Fragments arranged by size: 1080 372 363 KasI G'GCGC_C Cuts at: 0 20 1620 1815 Size: 20 1600 195 Fragments arranged by size: 1600 195 20 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 614 1181 1815 Size: 614 567 634 Fragments arranged by size: 634 614 567 MscI TGG'CCA Cuts at: 0 718 1815 Size: 718 1097 MslI CAynn'nnrTG Cuts at: 0 172 1815 Size: 172 1643 MspA1I CmG'CkG Cuts at: 0 200 495 639 645 750 1681 1746 1776 Size: 200 295 144 6 105 931 65 30 Cuts at: 1776 1815 Size: 39 Fragments arranged by size: 931 295 200 144 105 65 39 30 6 NaeI GCC'GGC Cuts at: 0 1589 1815 Size: 1589 226 NarI GG'CG_CC Cuts at: 0 21 1621 1815 Size: 21 1600 194 Fragments arranged by size: 1600 194 21 NcoI C'CATG_G Cuts at: 0 713 883 1815 Size: 713 170 932 Fragments arranged by size: 932 713 170 NgoMIV G'CCGG_C Cuts at: 0 1587 1815 Size: 1587 228 NspI r_CATG'y Cuts at: 0 177 1815 Size: 177 1638 PasI CC'CwG_GG Cuts at: 0 95 998 1034 1082 1626 1815 Size: 95 903 36 48 544 189 Fragments arranged by size: 903 544 189 95 48 36 PfoI T'CCnGG_A Cuts at: 0 818 1815 Size: 818 997 PmlI CAC'GTG Cuts at: 0 219 1815 Size: 219 1596 PpuMI rG'GwC_Cy Cuts at: 0 689 1043 1420 1815 Size: 689 354 377 395 Fragments arranged by size: 689 395 377 354 PspOMI G'GGCC_C Cuts at: 0 99 1063 1085 1815 Size: 99 964 22 730 Fragments arranged by size: 964 730 99 22 PstI C_TGCA'G Cuts at: 0 638 644 948 1815 Size: 638 6 304 867 Fragments arranged by size: 867 638 304 6 PvuII CAG'CTG Cuts at: 0 495 639 645 1681 1815 Size: 495 144 6 1036 134 Fragments arranged by size: 1036 495 144 134 6 SacI G_AGCT'C Cuts at: 0 1765 1815 Size: 1765 50 SacII CC_GC'GG Cuts at: 0 1777 1815 Size: 1777 38 SanDI GG'GwC_CC Cuts at: 0 1420 1815 Size: 1420 395 SexAI A'CCwGG_T Cuts at: 0 1164 1815 Size: 1164 651 SfcI C'TryA_G Cuts at: 0 525 634 640 944 1641 1815 Size: 525 109 6 304 697 174 Fragments arranged by size: 697 525 304 174 109 6 SfoI GGC'GCC Cuts at: 0 22 1622 1815 Size: 22 1600 193 Fragments arranged by size: 1600 193 22 SgrAI Cr'CCGG_yG Cuts at: 0 1587 1815 Size: 1587 228 SmaI CCC'GGG Cuts at: 0 538 1815 Size: 538 1277 SmlI C'TyrA_G Cuts at: 0 253 316 400 442 1815 Size: 253 63 84 42 1373 Fragments arranged by size: 1373 253 84 63 42 SphI G_CATG'C Cuts at: 0 177 1815 Size: 177 1638 StyI C'CwwG_G Cuts at: 0 449 713 883 1132 1220 1436 1815 Size: 449 264 170 249 88 216 379 Fragments arranged by size: 449 379 264 249 216 170 88 TatI w'GTAC_w Cuts at: 0 221 329 1815 Size: 221 108 1486 Fragments arranged by size: 1486 221 108 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 34 66 1815 Size: 34 32 1749 Fragments arranged by size: 1749 34 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 456 822 1227 1266 1815 Size: 456 366 405 39 549 Fragments arranged by size: 549 456 405 366 39 XmaI C'CCGG_G Cuts at: 0 536 1815 Size: 536 1279 XmnI GAAnn'nnTTC Cuts at: 0 1492 1815 Size: 1492 323 ZraI GAC'GTC Cuts at: 0 617 1815 Size: 617 1198 Enzymes that do cut: AarI AatII AcuI AfeI AflIII AhdI AlwNI ApaI ApaLI AvaI BamHI BanI BanII BbeI BbsI BbvCI BglI BlpI Bme1580I BmrI BpmI Bpu10I BpuEI BsaI BsaAI BsaHI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmBI Bsp1286I BspMI BsrBI BsrDI BsrFI BsrGI BstAPI BstYI Bsu36I BtgI BtsI DraIII DrdI EaeI EarI EcoICRI Eco57MI EcoNI EcoO109I FspI FspAI HaeII Hin4I HincII KasI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NspI PasI PfoI PmlI PpuMI PspOMI PstI PvuII SacI SacII SanDI SexAI SfcI SfoI SgrAI SmaI SmlI SphI StyI TatI TstI XcmI XmaI XmnI ZraI Enzymes that do not cut: AccI Acc65I AclI AflII AgeI AleI AlfI AloI ApoI AscI AseI AsiSI AvrII BaeI BcgI BciVI BclI BfrBI BglII BmgBI BmtI BplI BsaBI BsaWI BsiWI BsmI BspEI BspHI BssHII BssSI BstBI BstEII BstXI BstZ17I BtgZI ClaI CspCI DraI EagI EciI EcoRI EcoRV FalI FseI HindIII HpaI KpnI MfeI MluI NdeI NheI NotI NruI NsiI PacI PciI PflMI PmeI PpiI PshAI PsiI PspXI PsrI PvuI RsrII SalI SapI SbfI ScaI SfiI SgfI SnaBI SpeI SrfI SspI StuI SwaI TaqII Tth111I XbaI XhoI