(Linear) (Six-base) MAPSORT of: KIBB3715.seq Check: 4823 from: 1 to: 624
KIBB3715.orf
With 182 enzymes: SgfI *
July 18, 2007 13:37 ..
AatII G_ACGT'C
Cuts at: 0 82 332 624
Size: 82 250 292
Fragments arranged by size:
292 250 82
AflIII A'CryG_T
Cuts at: 0 504 624
Size: 504 120
AhdI GACnn_n'nnGTC
Cuts at: 0 150 624
Size: 150 474
ApoI r'AATT_y
Cuts at: 0 37 624
Size: 37 587
BanII G_rGCy'C
Cuts at: 0 596 624
Size: 596 28
BbsI GAAGACnn'nnnn_
Cuts at: 0 82 478 624
Size: 82 396 146
Fragments arranged by size:
396 146 82
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'
Cuts at: 0 481 515 624
Size: 481 34 109
Fragments arranged by size:
481 109 34
BmgBI CAC'GTC
Cuts at: 0 505 624
Size: 505 119
BsaI GGTCTCn'nnnn_
Cuts at: 0 454 624
Size: 454 170
BsaBI GATnn'nnATC
Cuts at: 0 409 568 624
Size: 409 159 56
Fragments arranged by size:
409 159 56
BsaHI Gr'CG_yC
Cuts at: 0 79 329 511 624
Size: 79 250 182 113
Fragments arranged by size:
250 182 113 79
BseRI GAGGAGnnnnnnnn_nn'
Cuts at: 0 430 624
Size: 430 194
BseYI C'CCAG_C
Cuts at: 0 238 624
Size: 238 386
BsmBI CGTCTCn'nnnn_
Cuts at: 0 86 624
Size: 86 538
Bsp1286I G_dGCh'C
Cuts at: 0 596 624
Size: 596 28
BssHII G'CGCG_C
Cuts at: 0 429 624
Size: 429 195
BstXI CCAn_nnnn'nTGG
Cuts at: 0 168 624
Size: 168 456
BtgI C'CryG_G
Cuts at: 0 257 624
Size: 257 367
BtsI GCAGTG_nn'
Cuts at: 0 354 624
Size: 354 270
EaeI y'GGCC_r
Cuts at: 0 599 624
Size: 599 25
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'
Cuts at: 0 136 168 179 211 624
Size: 136 32 11 32 413
Fragments arranged by size:
413 136 32 32 11
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'
Cuts at: 0 327 624
Size: 327 297
MslI CAynn'nnrTG
Cuts at: 0 367 624
Size: 367 257
MspA1I CmG'CkG
Cuts at: 0 208 624
Size: 208 416
PfoI T'CCnGG_A
Cuts at: 0 248 539 624
Size: 248 291 85
Fragments arranged by size:
291 248 85
PstI C_TGCA'G
Cuts at: 0 194 624
Size: 194 430
PvuII CAG'CTG
Cuts at: 0 208 624
Size: 208 416
SfcI C'TryA_G
Cuts at: 0 190 624
Size: 190 434
TatI w'GTAC_w
Cuts at: 0 164 624
Size: 164 460
Tth111I GACn'n_nGTC
Cuts at: 0 328 624
Size: 328 296
XcmI CCAnnnn_n'nnnnTGG
Cuts at: 0 133 264 624
Size: 133 131 360
Fragments arranged by size:
360 133 131
ZraI GAC'GTC
Cuts at: 0 80 330 624
Size: 80 250 294
Fragments arranged by size:
294 250 80
Enzymes that do cut:
AatII AflIII AhdI ApoI BanII BbsI BcgI BmgBI
BsaI BsaBI BsaHI BseRI BseYI BsmBI Bsp1286I BssHII
BstXI BtgI BtsI EaeI Hin4I MmeI MslI MspA1I
PfoI PstI PvuII SfcI TatI Tth111I XcmI ZraI
Enzymes that do not cut:
AarI AccI Acc65I AclI AcuI AfeI AflII AgeI
AleI AlfI AloI AlwNI ApaI ApaLI AscI AseI
AsiSI AvaI AvrII BaeI BamHI BanI BbeI BbvCI
BciVI BclI BfrBI BglI BglII BlpI Bme1580I BmrI
BmtI BplI BpmI Bpu10I BpuEI BsaAI BsaWI BsaXI
BsgI BsiEI BsiHKAI BsiWI BsmI BspEI BspHI BspMI
BsrBI BsrDI BsrFI BsrGI BssSI BstAPI BstBI BstEII
BstYI BstZ17I Bsu36I BtgZI ClaI CspCI DraI DraIII
DrdI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I
EcoRI EcoRV FalI FseI FspI FspAI HaeII HincII
HindIII HpaI KasI KpnI MfeI MluI MscI NaeI
NarI NcoI NdeI NgoMIV NheI NotI NruI NsiI
NspI PacI PasI PciI PflMI PmeI PmlI PpiI
PpuMI PshAI PsiI PspOMI PspXI PsrI PvuI RsrII
SacI SacII SalI SanDI SapI SbfI ScaI SexAI
SfiI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI
SphI SrfI SspI StuI StyI SwaI TaqII TstI
XbaI XhoI XmaI XmnI