(Linear) (Six-base) MAPSORT of: KIBB5288.seq Check: 2130 from: 1 to: 1650 KIBB5288.orf With 182 enzymes: SgfI * April 24, 2009 13:04 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 237 1650 Size: 237 1413 Acc65I G'GTAC_C Cuts at: 0 901 1650 Size: 901 749 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1132 1650 Size: 1132 518 AfeI AGC'GCT Cuts at: 0 301 1650 Size: 301 1349 AhdI GACnn_n'nnGTC Cuts at: 0 1157 1650 Size: 1157 493 AleI CACnn'nnGTG Cuts at: 0 351 1650 Size: 351 1299 AlwNI CAG_nnn'CTG Cuts at: 0 165 252 1009 1650 Size: 165 87 757 641 Fragments arranged by size: 757 641 165 87 ApaI G_GGCC'C Cuts at: 0 576 1650 Size: 576 1074 AvaI C'yCGr_G Cuts at: 0 1052 1650 Size: 1052 598 AvrII C'CTAG_G Cuts at: 0 1549 1650 Size: 1549 101 BanI G'GyrC_C Cuts at: 0 901 1650 Size: 901 749 BanII G_rGCy'C Cuts at: 0 576 1557 1650 Size: 576 981 93 Fragments arranged by size: 981 576 93 BbsI GAAGACnn'nnnn_ Cuts at: 0 265 1650 Size: 265 1385 BbvCI CC'TCA_GC Cuts at: 0 208 509 1580 1650 Size: 208 301 1071 70 Fragments arranged by size: 1071 301 208 70 BglI GCCn_nnn'nGGC Cuts at: 0 1462 1650 Size: 1462 188 BlpI GC'TnA_GC Cuts at: 0 296 866 1650 Size: 296 570 784 Fragments arranged by size: 784 570 296 Bme1580I G_kGCm'C Cuts at: 0 576 945 1650 Size: 576 369 705 Fragments arranged by size: 705 576 369 BmrI ACTGGGnnnn_n' Cuts at: 0 700 948 1019 1650 Size: 700 248 71 631 Fragments arranged by size: 700 631 248 71 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 43 88 187 1408 1621 1650 Size: 43 45 99 1221 213 29 Fragments arranged by size: 1221 213 99 45 43 29 Bpu10I CC'TnA_GC Cuts at: 0 208 509 1102 1580 1650 Size: 208 301 593 478 70 Fragments arranged by size: 593 478 301 208 70 BsaI GGTCTCn'nnnn_ Cuts at: 0 1497 1650 Size: 1497 153 BsaWI w'CCGG_w Cuts at: 0 107 338 1650 Size: 107 231 1312 Fragments arranged by size: 1312 231 107 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 1177 1207 1248 1278 1650 Size: 1177 30 41 30 372 Fragments arranged by size: 1177 372 41 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 621 826 1650 Size: 621 205 824 Fragments arranged by size: 824 621 205 BseYI C'CCAG_C Cuts at: 0 149 252 398 423 667 922 1367 1467 Size: 149 103 146 25 244 255 445 100 Cuts at: 1467 1650 Size: 183 Fragments arranged by size: 445 255 244 183 149 146 103 100 25 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 934 1650 Size: 934 716 BsiEI CG_ry'CG Cuts at: 0 318 1650 Size: 318 1332 BsiHKAI G_wGCw'C Cuts at: 0 503 1650 Size: 503 1147 Bsp1286I G_dGCh'C Cuts at: 0 503 576 945 1557 1650 Size: 503 73 369 612 93 Fragments arranged by size: 612 503 369 93 73 BspEI T'CCGG_A Cuts at: 0 107 338 1650 Size: 107 231 1312 Fragments arranged by size: 1312 231 107 BspHI T'CATG_A Cuts at: 0 807 1244 1650 Size: 807 437 406 Fragments arranged by size: 807 437 406 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 237 1650 Size: 237 1413 BsrBI CCG'CTC Cuts at: 0 629 1650 Size: 629 1021 BsrDI GCAATG_nn' Cuts at: 0 501 1418 1650 Size: 501 917 232 Fragments arranged by size: 917 501 232 BsrFI r'CCGG_y Cuts at: 0 266 986 1650 Size: 266 720 664 Fragments arranged by size: 720 664 266 BstXI CCAn_nnnn'nTGG Cuts at: 0 353 1650 Size: 353 1297 BstYI r'GATC_y Cuts at: 0 104 1650 Size: 104 1546 Bsu36I CC'TnA_GG Cuts at: 0 633 907 995 1650 Size: 633 274 88 655 Fragments arranged by size: 655 633 274 88 BtgI C'CryG_G Cuts at: 0 312 1591 1650 Size: 312 1279 59 Fragments arranged by size: 1279 312 59 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 638 1326 1650 Size: 638 688 324 Fragments arranged by size: 688 638 324 BtsI GCAGTG_nn' Cuts at: 0 770 890 1168 1234 1650 Size: 770 120 278 66 416 Fragments arranged by size: 770 416 278 120 66 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 690 725 1650 Size: 690 35 925 Fragments arranged by size: 925 690 35 EaeI y'GGCC_r Cuts at: 0 315 1650 Size: 315 1335 EagI C'GGCC_G Cuts at: 0 315 1650 Size: 315 1335 EarI CTCTTCn'nnn_ Cuts at: 0 508 560 982 1010 1650 Size: 508 52 422 28 640 Fragments arranged by size: 640 508 422 52 28 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 43 88 187 1132 1408 1621 1650 Size: 43 45 99 945 276 213 29 Fragments arranged by size: 945 276 213 99 45 43 29 EcoNI CCTnn'n_nnAGG Cuts at: 0 636 1650 Size: 636 1014 EcoO109I rG'GnC_Cy Cuts at: 0 27 122 467 551 572 573 1301 1650 Size: 27 95 345 84 21 1 728 349 Fragments arranged by size: 728 349 345 95 84 27 21 1 HaeII r_GCGC'y Cuts at: 0 303 1650 Size: 303 1347 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 2 34 1143 1173 1175 1205 1650 Size: 2 32 1109 30 2 30 445 Fragments arranged by size: 1109 445 32 30 30 2 2 HincII GTy'rAC Cuts at: 0 1041 1650 Size: 1041 609 KpnI G_GTAC'C Cuts at: 0 905 1650 Size: 905 745 MslI CAynn'nnrTG Cuts at: 0 351 448 1650 Size: 351 97 1202 Fragments arranged by size: 1202 351 97 MspA1I CmG'CkG Cuts at: 0 231 295 314 398 423 1023 1332 1348 Size: 231 64 19 84 25 600 309 16 Cuts at: 1348 1371 1650 Size: 23 279 Fragments arranged by size: 600 309 279 231 84 64 25 23 19 16 NaeI GCC'GGC Cuts at: 0 268 1650 Size: 268 1382 NgoMIV G'CCGG_C Cuts at: 0 266 1650 Size: 266 1384 PasI CC'CwG_GG Cuts at: 0 621 1496 1650 Size: 621 875 154 Fragments arranged by size: 875 621 154 PflMI CCAn_nnn'nTGG Cuts at: 0 712 735 1287 1317 1650 Size: 712 23 552 30 333 Fragments arranged by size: 712 552 333 30 23 PfoI T'CCnGG_A Cuts at: 0 20 437 1650 Size: 20 417 1213 Fragments arranged by size: 1213 417 20 PpuMI rG'GwC_Cy Cuts at: 0 27 467 1301 1650 Size: 27 440 834 349 Fragments arranged by size: 834 440 349 27 PshAI GACnn'nnGTC Cuts at: 0 1054 1650 Size: 1054 596 PspOMI G'GGCC_C Cuts at: 0 572 1650 Size: 572 1078 PspXI vC'TCGA_Gb Cuts at: 0 1052 1650 Size: 1052 598 PstI C_TGCA'G Cuts at: 0 230 422 1175 1612 1650 Size: 230 192 753 437 38 Fragments arranged by size: 753 437 230 192 38 PvuII CAG'CTG Cuts at: 0 423 1650 Size: 423 1227 SacII CC_GC'GG Cuts at: 0 315 1650 Size: 315 1335 SapI GCTCTTCn'nnn_ Cuts at: 0 508 1010 1650 Size: 508 502 640 Fragments arranged by size: 640 508 502 SfcI C'TryA_G Cuts at: 0 226 418 1171 1608 1650 Size: 226 192 753 437 42 Fragments arranged by size: 753 437 226 192 42 SmlI C'TyrA_G Cuts at: 0 1052 1650 Size: 1052 598 SspI AAT'ATT Cuts at: 0 370 1650 Size: 370 1280 StuI AGG'CCT Cuts at: 0 1604 1650 Size: 1604 46 StyI C'CwwG_G Cuts at: 0 1549 1650 Size: 1549 101 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1177 1209 1650 Size: 1177 32 441 Fragments arranged by size: 1177 441 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 753 1475 1650 Size: 753 722 175 Fragments arranged by size: 753 722 175 XhoI C'TCGA_G Cuts at: 0 1052 1650 Size: 1052 598 XmnI GAAnn'nnTTC Cuts at: 0 1515 1650 Size: 1515 135 Enzymes that do cut: AarI Acc65I AcuI AfeI AhdI AleI AlwNI ApaI AvaI AvrII BanI BanII BbsI BbvCI BglI BlpI Bme1580I BmrI BpmI Bpu10I BsaI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BstXI BstYI Bsu36I BtgI BtgZI BtsI CspCI EaeI EagI EarI Eco57MI EcoNI EcoO109I HaeII Hin4I HincII KpnI MslI MspA1I NaeI NgoMIV PasI PflMI PfoI PpuMI PshAI PspOMI PspXI PstI PvuII SacII SapI SfcI SmlI SspI StuI StyI TstI XcmI XhoI XmnI Enzymes that do not cut: AatII AccI AclI AflII AflIII AgeI AlfI AloI ApaLI ApoI AscI AseI AsiSI BaeI BamHI BbeI BcgI BciVI BclI BfrBI BglII BmgBI BmtI BplI BpuEI BsaAI BsaBI BsaHI BsiWI BsmI BsmBI BsrGI BssHII BssSI BstAPI BstBI BstEII BstZ17I ClaI DraI DraIII DrdI EciI EcoICRI EcoRI EcoRV FalI FseI FspI FspAI HindIII HpaI KasI MfeI MluI MmeI MscI NarI NcoI NdeI NheI NotI NruI NsiI NspI PacI PciI PmeI PmlI PpiI PsiI PsrI PvuI RsrII SacI SalI SanDI SbfI ScaI SexAI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI SwaI TaqII TatI Tth111I XbaI XmaI ZraI