(Linear) (Six-base) MAPSORT of: KIBB5530.seq Check: 8771 from: 1 to: 360
KIBB5530.orf
With 182 enzymes: SgfI *
July 18, 2007 13:38 ..
AvaI C'yCGr_G
Cuts at: 0 112 360
Size: 112 248
BanI G'GyrC_C
Cuts at: 0 253 360
Size: 253 107
BbsI GAAGACnn'nnnn_
Cuts at: 0 272 360
Size: 272 88
BsaBI GATnn'nnATC
Cuts at: 0 355 360
Size: 355 5
BsaHI Gr'CG_yC
Cuts at: 0 77 360
Size: 77 283
BseYI C'CCAG_C
Cuts at: 0 31 360
Size: 31 329
BspHI T'CATG_A
Cuts at: 0 93 360
Size: 93 267
BsrFI r'CCGG_y
Cuts at: 0 13 360
Size: 13 347
BtgI C'CryG_G
Cuts at: 0 62 197 360
Size: 62 135 163
Fragments arranged by size:
163 135 62
EaeI y'GGCC_r
Cuts at: 0 21 65 360
Size: 21 44 295
Fragments arranged by size:
295 44 21
EarI CTCTTCn'nnn_
Cuts at: 0 130 360
Size: 130 230
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'
Cuts at: 0 158 360
Size: 158 202
MscI TGG'CCA
Cuts at: 0 67 360
Size: 67 293
MspA1I CmG'CkG
Cuts at: 0 20 360
Size: 20 340
NaeI GCC'GGC
Cuts at: 0 15 360
Size: 15 345
NcoI C'CATG_G
Cuts at: 0 197 360
Size: 197 163
NgoMIV G'CCGG_C
Cuts at: 0 13 360
Size: 13 347
NspI r_CATG'y
Cuts at: 0 325 360
Size: 325 35
SapI GCTCTTCn'nnn_
Cuts at: 0 130 360
Size: 130 230
SmaI CCC'GGG
Cuts at: 0 114 360
Size: 114 246
StyI C'CwwG_G
Cuts at: 0 197 360
Size: 197 163
XcmI CCAnnnn_n'nnnnTGG
Cuts at: 0 60 360
Size: 60 300
XmaI C'CCGG_G
Cuts at: 0 112 360
Size: 112 248
Enzymes that do cut:
AvaI BanI BbsI BsaBI BsaHI BseYI BspHI BsrFI
BtgI EaeI EarI MmeI MscI MspA1I NaeI NcoI
NgoMIV NspI SapI SmaI StyI XcmI XmaI
Enzymes that do not cut:
AarI AatII AccI Acc65I AclI AcuI AfeI AflII
AflIII AgeI AhdI AleI AlfI AloI AlwNI ApaI
ApaLI ApoI AscI AseI AsiSI AvrII BaeI BamHI
BanII BbeI BbvCI BcgI BciVI BclI BfrBI BglI
BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI
Bpu10I BpuEI BsaI BsaAI BsaWI BsaXI BseRI BsgI
BsiEI BsiHKAI BsiWI BsmI BsmBI Bsp1286I BspEI BspMI
BsrBI BsrDI BsrGI BssHII BssSI BstAPI BstBI BstEII
BstXI BstYI BstZ17I Bsu36I BtgZI BtsI ClaI CspCI
DraI DraIII DrdI EagI EciI EcoICRI Eco57MI EcoNI
EcoO109I EcoRI EcoRV FalI FseI FspI FspAI HaeII
Hin4I HincII HindIII HpaI KasI KpnI MfeI MluI
MslI NarI NdeI NheI NotI NruI NsiI PacI
PasI PciI PflMI PfoI PmeI PmlI PpiI PpuMI
PshAI PsiI PspOMI PspXI PsrI PstI PvuI PvuII
RsrII SacI SacII SalI SanDI SbfI ScaI SexAI
SfcI SfiI SfoI SgfI SgrAI SmlI SnaBI SpeI
SphI SrfI SspI StuI SwaI TaqII TatI TstI
Tth111I XbaI XhoI XmnI ZraI