(Linear) (Six-base) MAPSORT of: KIBB5995.seq Check: 4435 from: 1 to: 1731 KIBB5995.orf With 182 enzymes: SgfI * October 7, 2009 14:19 .. AccI GT'mk_AC Cuts at: 0 143 1539 1731 Size: 143 1396 192 Fragments arranged by size: 1396 192 143 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 104 322 472 1731 Size: 104 218 150 1259 Fragments arranged by size: 1259 218 150 104 AflIII A'CryG_T Cuts at: 0 479 1731 Size: 479 1252 AhdI GACnn_n'nnGTC Cuts at: 0 356 1731 Size: 356 1375 AlwNI CAG_nnn'CTG Cuts at: 0 787 799 1414 1731 Size: 787 12 615 317 Fragments arranged by size: 787 615 317 12 ApoI r'AATT_y Cuts at: 0 241 566 1731 Size: 241 325 1165 Fragments arranged by size: 1165 325 241 AvaI C'yCGr_G Cuts at: 0 953 1132 1220 1250 1340 1573 1731 Size: 953 179 88 30 90 233 158 Fragments arranged by size: 953 233 179 158 90 88 30 BamHI G'GATC_C Cuts at: 0 546 646 925 1215 1489 1731 Size: 546 100 279 290 274 242 Fragments arranged by size: 546 290 279 274 242 100 BanI G'GyrC_C Cuts at: 0 319 1731 Size: 319 1412 BanII G_rGCy'C Cuts at: 0 1139 1731 Size: 1139 592 BbvCI CC'TCA_GC Cuts at: 0 614 1731 Size: 614 1117 BciVI GTATCCnnnnn_n' Cuts at: 0 1389 1696 1731 Size: 1389 307 35 Fragments arranged by size: 1389 307 35 BfrBI ATG'CAT Cuts at: 0 711 1731 Size: 711 1020 BglI GCCn_nnn'nGGC Cuts at: 0 688 1261 1559 1731 Size: 688 573 298 172 Fragments arranged by size: 688 573 298 172 Bme1580I G_kGCm'C Cuts at: 0 324 1731 Size: 324 1407 BmrI ACTGGGnnnn_n' Cuts at: 0 687 1402 1448 1498 1731 Size: 687 715 46 50 233 Fragments arranged by size: 715 687 233 50 46 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 842 1034 1731 Size: 842 192 697 Fragments arranged by size: 842 697 192 Bpu10I CC'TnA_GC Cuts at: 0 614 642 813 839 1670 1731 Size: 614 28 171 26 831 61 Fragments arranged by size: 831 614 171 61 28 26 BsaI GGTCTCn'nnnn_ Cuts at: 0 14 343 1731 Size: 14 329 1388 Fragments arranged by size: 1388 329 14 BsaWI w'CCGG_w Cuts at: 0 549 1731 Size: 549 1182 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 719 839 1731 Size: 719 120 892 Fragments arranged by size: 892 719 120 BseYI C'CCAG_C Cuts at: 0 24 631 1731 Size: 24 607 1100 Fragments arranged by size: 1100 607 24 BsiHKAI G_wGCw'C Cuts at: 0 258 1728 1731 Size: 258 1470 3 Fragments arranged by size: 1470 258 3 BsmI GAATG_Cn' Cuts at: 0 713 836 854 1448 1529 1731 Size: 713 123 18 594 81 202 Fragments arranged by size: 713 594 202 123 81 18 Bsp1286I G_dGCh'C Cuts at: 0 258 324 1139 1728 1731 Size: 258 66 815 589 3 Fragments arranged by size: 815 589 258 66 3 BspEI T'CCGG_A Cuts at: 0 549 1731 Size: 549 1182 BspHI T'CATG_A Cuts at: 0 1602 1731 Size: 1602 129 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1617 1731 Size: 1617 114 BsrDI GCAATG_nn' Cuts at: 0 1307 1337 1367 1731 Size: 1307 30 30 364 Fragments arranged by size: 1307 364 30 30 BssSI C'ACGA_G Cuts at: 0 1235 1325 1731 Size: 1235 90 406 Fragments arranged by size: 1235 406 90 BstAPI GCAn_nnn'nTGC Cuts at: 0 214 1731 Size: 214 1517 BstXI CCAn_nnnn'nTGG Cuts at: 0 631 1078 1392 1731 Size: 631 447 314 339 Fragments arranged by size: 631 447 339 314 BstYI r'GATC_y Cuts at: 0 546 646 925 1215 1489 1731 Size: 546 100 279 290 274 242 Fragments arranged by size: 546 290 279 274 242 100 BstZ17I GTA'TAC Cuts at: 0 144 1540 1731 Size: 144 1396 191 Fragments arranged by size: 1396 191 144 Bsu36I CC'TnA_GG Cuts at: 0 362 677 686 1731 Size: 362 315 9 1045 Fragments arranged by size: 1045 362 315 9 BtgI C'CryG_G Cuts at: 0 624 872 985 1256 1731 Size: 624 248 113 271 475 Fragments arranged by size: 624 475 271 248 113 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 559 1330 1360 1731 Size: 559 771 30 371 Fragments arranged by size: 771 559 371 30 DraI TTT'AAA Cuts at: 0 1697 1731 Size: 1697 34 DraIII CAC_nnn'GTG Cuts at: 0 214 1731 Size: 214 1517 EaeI y'GGCC_r Cuts at: 0 1080 1731 Size: 1080 651 EarI CTCTTCn'nnn_ Cuts at: 0 80 290 298 1731 Size: 80 210 8 1433 Fragments arranged by size: 1433 210 80 8 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 104 322 472 842 1034 1731 Size: 104 218 150 370 192 697 Fragments arranged by size: 697 370 218 192 150 104 EcoNI CCTnn'n_nnAGG Cuts at: 0 641 824 1731 Size: 641 183 907 Fragments arranged by size: 907 641 183 EcoO109I rG'GnC_Cy Cuts at: 0 681 796 1165 1426 1450 1500 1731 Size: 681 115 369 261 24 50 231 Fragments arranged by size: 681 369 261 231 115 50 24 EcoRI G'AATT_C Cuts at: 0 241 1731 Size: 241 1490 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 120 1731 Size: 120 1611 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 338 342 370 374 1308 1340 1731 Size: 338 4 28 4 934 32 391 Fragments arranged by size: 934 391 338 32 28 4 4 HindIII A'AGCT_T Cuts at: 0 740 1731 Size: 740 991 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 96 825 1731 Size: 96 729 906 Fragments arranged by size: 906 729 96 MscI TGG'CCA Cuts at: 0 1082 1731 Size: 1082 649 MslI CAynn'nnrTG Cuts at: 0 716 1731 Size: 716 1015 MspA1I CmG'CkG Cuts at: 0 28 784 921 1731 Size: 28 756 137 810 Fragments arranged by size: 810 756 137 28 NcoI C'CATG_G Cuts at: 0 624 872 1256 1731 Size: 624 248 384 475 Fragments arranged by size: 624 475 384 248 NsiI A_TGCA'T Cuts at: 0 713 1731 Size: 713 1018 NspI r_CATG'y Cuts at: 0 483 715 1731 Size: 483 232 1016 Fragments arranged by size: 1016 483 232 PasI CC'CwG_GG Cuts at: 0 1485 1731 Size: 1485 246 PciI A'CATG_T Cuts at: 0 479 1731 Size: 479 1252 PflMI CCAn_nnn'nTGG Cuts at: 0 625 699 859 1414 1731 Size: 625 74 160 555 317 Fragments arranged by size: 625 555 317 160 74 PfoI T'CCnGG_A Cuts at: 0 819 1731 Size: 819 912 PpuMI rG'GwC_Cy Cuts at: 0 796 1165 1426 1450 1500 1731 Size: 796 369 261 24 50 231 Fragments arranged by size: 796 369 261 231 50 24 PshAI GACnn'nnGTC Cuts at: 0 867 1731 Size: 867 864 PspXI vC'TCGA_Gb Cuts at: 0 953 1731 Size: 953 778 PstI C_TGCA'G Cuts at: 0 1647 1731 Size: 1647 84 PvuII CAG'CTG Cuts at: 0 784 1731 Size: 784 947 SanDI GG'GwC_CC Cuts at: 0 1450 1731 Size: 1450 281 SapI GCTCTTCn'nnn_ Cuts at: 0 80 290 298 1731 Size: 80 210 8 1433 Fragments arranged by size: 1433 210 80 8 SfcI C'TryA_G Cuts at: 0 1643 1731 Size: 1643 88 SfiI GGCCn_nnn'nGGCC Cuts at: 0 688 1731 Size: 688 1043 SmaI CCC'GGG Cuts at: 0 1575 1731 Size: 1575 156 SmlI C'TyrA_G Cuts at: 0 953 1731 Size: 953 778 StyI C'CwwG_G Cuts at: 0 309 624 872 1193 1256 1731 Size: 309 315 248 321 63 475 Fragments arranged by size: 475 321 315 309 248 63 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 691 1077 1731 Size: 691 386 654 Fragments arranged by size: 691 654 386 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 638 670 1731 Size: 638 32 1061 Fragments arranged by size: 1061 638 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 700 1146 1731 Size: 700 446 585 Fragments arranged by size: 700 585 446 XhoI C'TCGA_G Cuts at: 0 953 1731 Size: 953 778 XmaI C'CCGG_G Cuts at: 0 1573 1731 Size: 1573 158 Enzymes that do cut: AccI AcuI AflIII AhdI AlwNI ApoI AvaI BamHI BanI BanII BbvCI BciVI BfrBI BglI Bme1580I BmrI BpmI Bpu10I BsaI BsaWI BseRI BseYI BsiHKAI BsmI Bsp1286I BspEI BspHI BspMI BsrDI BssSI BstAPI BstXI BstYI BstZ17I Bsu36I BtgI BtgZI DraI DraIII EaeI EarI Eco57MI EcoNI EcoO109I EcoRI FalI Hin4I HindIII MmeI MscI MslI MspA1I NcoI NsiI NspI PasI PciI PflMI PfoI PpuMI PshAI PspXI PstI PvuII SanDI SapI SfcI SfiI SmaI SmlI StyI TaqII TstI XcmI XhoI XmaI Enzymes that do not cut: AarI AatII Acc65I AclI AfeI AflII AgeI AleI AlfI AloI ApaI ApaLI AscI AseI AsiSI AvrII BaeI BbeI BbsI BcgI BclI BglII BlpI BmgBI BmtI BplI BpuEI BsaAI BsaBI BsaHI BsaXI BsgI BsiEI BsiWI BsmBI BsrBI BsrFI BsrGI BssHII BstBI BstEII BtsI ClaI CspCI DrdI EagI EciI EcoICRI EcoRV FseI FspI FspAI HaeII HincII HpaI KasI KpnI MfeI MluI NaeI NarI NdeI NgoMIV NheI NotI NruI PacI PmeI PmlI PpiI PsiI PspOMI PsrI PvuI RsrII SacI SacII SalI SbfI ScaI SexAI SfoI SgfI SgrAI SnaBI SpeI SphI SrfI SspI StuI SwaI TatI Tth111I XbaI XmnI ZraI