(Linear) (Six-base) MAPSORT of: KIBB7822.seq Check: 5604 from: 1 to: 1800 KIBB7822.orf With 182 enzymes: SgfI * June 26, 2008 10:49 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 1215 1800 Size: 1215 585 AatII G_ACGT'C Cuts at: 0 179 1800 Size: 179 1621 Acc65I G'GTAC_C Cuts at: 0 1187 1800 Size: 1187 613 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 400 1564 1800 Size: 400 1164 236 Fragments arranged by size: 1164 400 236 AleI CACnn'nnGTG Cuts at: 0 931 1800 Size: 931 869 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 345 1800 Size: 345 1455 AlwNI CAG_nnn'CTG Cuts at: 0 405 420 756 1050 1800 Size: 405 15 336 294 750 Fragments arranged by size: 750 405 336 294 15 ApaLI G'TGCA_C Cuts at: 0 1345 1800 Size: 1345 455 AvaI C'yCGr_G Cuts at: 0 409 696 985 1103 1196 1631 1800 Size: 409 287 289 118 93 435 169 Fragments arranged by size: 435 409 289 287 169 118 93 BanI G'GyrC_C Cuts at: 0 933 1187 1593 1800 Size: 933 254 406 207 Fragments arranged by size: 933 406 254 207 BanII G_rGCy'C Cuts at: 0 206 847 886 1094 1165 1411 1521 1800 Size: 206 641 39 208 71 246 110 279 Fragments arranged by size: 641 279 246 208 206 110 71 39 BbvCI CC'TCA_GC Cuts at: 0 1232 1800 Size: 1232 568 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 1725 1759 1800 Size: 1725 34 41 Fragments arranged by size: 1725 41 34 BglI GCCn_nnn'nGGC Cuts at: 0 214 614 1800 Size: 214 400 1186 Fragments arranged by size: 1186 400 214 Bme1580I G_kGCm'C Cuts at: 0 893 1349 1800 Size: 893 456 451 Fragments arranged by size: 893 456 451 BmrI ACTGGGnnnn_n' Cuts at: 0 992 1006 1800 Size: 992 14 794 Fragments arranged by size: 992 794 14 BmtI G_CTAG'C Cuts at: 0 506 1800 Size: 506 1294 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 90 133 382 646 1387 1800 Size: 90 43 249 264 741 413 Fragments arranged by size: 741 413 264 249 90 43 Bpu10I CC'TnA_GC Cuts at: 0 1232 1468 1800 Size: 1232 236 332 Fragments arranged by size: 1232 332 236 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 163 1045 1800 Size: 163 882 755 Fragments arranged by size: 882 755 163 BsaI GGTCTCn'nnnn_ Cuts at: 0 498 1800 Size: 498 1302 BsaHI Gr'CG_yC Cuts at: 0 16 176 1241 1800 Size: 16 160 1065 559 Fragments arranged by size: 1065 559 160 16 BsaWI w'CCGG_w Cuts at: 0 74 1253 1800 Size: 74 1179 547 Fragments arranged by size: 1179 547 74 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 24 676 706 1345 1375 1800 Size: 24 652 30 639 30 425 Fragments arranged by size: 652 639 425 30 30 24 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 214 1116 1143 1567 1800 Size: 214 902 27 424 233 Fragments arranged by size: 902 424 233 214 27 BseYI C'CCAG_C Cuts at: 0 429 892 1083 1800 Size: 429 463 191 717 Fragments arranged by size: 717 463 429 191 BsiEI CG_ry'CG Cuts at: 0 337 682 1800 Size: 337 345 1118 Fragments arranged by size: 1118 345 337 BsiHKAI G_wGCw'C Cuts at: 0 206 1349 1561 1800 Size: 206 1143 212 239 Fragments arranged by size: 1143 239 212 206 BsiWI C'GTAC_G Cuts at: 0 975 1800 Size: 975 825 BsmBI CGTCTCn'nnnn_ Cuts at: 0 23 1800 Size: 23 1777 Bsp1286I G_dGCh'C Cuts at: 0 206 847 886 893 1094 1165 1349 1411 Size: 206 641 39 7 201 71 184 62 Cuts at: 1411 1521 1561 1800 Size: 110 40 239 Fragments arranged by size: 641 239 206 201 184 110 71 62 40 39 7 BspEI T'CCGG_A Cuts at: 0 74 1800 Size: 74 1726 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1215 1800 Size: 1215 585 BsrBI CCG'CTC Cuts at: 0 1266 1800 Size: 1266 534 BsrDI GCAATG_nn' Cuts at: 0 396 1800 Size: 396 1404 BsrFI r'CCGG_y Cuts at: 0 38 255 301 332 1472 1800 Size: 38 217 46 31 1140 328 Fragments arranged by size: 1140 328 217 46 38 31 BssHII G'CGCG_C Cuts at: 0 1502 1800 Size: 1502 298 BstAPI GCAn_nnn'nTGC Cuts at: 0 922 1800 Size: 922 878 BstBI TT'CG_AA Cuts at: 0 1415 1800 Size: 1415 385 BstEII G'GTnAC_C Cuts at: 0 451 1800 Size: 451 1349 BstXI CCAn_nnnn'nTGG Cuts at: 0 585 1019 1800 Size: 585 434 781 Fragments arranged by size: 781 585 434 BstYI r'GATC_y Cuts at: 0 659 1800 Size: 659 1141 Bsu36I CC'TnA_GG Cuts at: 0 1155 1800 Size: 1155 645 BtgI C'CryG_G Cuts at: 0 904 1610 1800 Size: 904 706 190 Fragments arranged by size: 904 706 190 BtsI GCAGTG_nn' Cuts at: 0 600 1738 1800 Size: 600 1138 62 Fragments arranged by size: 1138 600 62 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 633 668 1800 Size: 633 35 1132 Fragments arranged by size: 1132 633 35 DrdI GACnn_nn'nnGTC Cuts at: 0 517 1800 Size: 517 1283 EaeI y'GGCC_r Cuts at: 0 334 468 1678 1800 Size: 334 134 1210 122 Fragments arranged by size: 1210 334 134 122 EagI C'GGCC_G Cuts at: 0 334 1800 Size: 334 1466 EarI CTCTTCn'nnn_ Cuts at: 0 376 1177 1800 Size: 376 801 623 Fragments arranged by size: 801 623 376 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 1150 1800 Size: 1150 650 EcoICRI GAG'CTC Cuts at: 0 204 1800 Size: 204 1596 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 90 133 382 400 646 1387 1564 1800 Size: 90 43 249 18 246 741 177 236 Fragments arranged by size: 741 249 246 236 177 90 43 18 EcoNI CCTnn'n_nnAGG Cuts at: 0 1546 1800 Size: 1546 254 EcoO109I rG'GnC_Cy Cuts at: 0 781 799 1800 Size: 781 18 1001 Fragments arranged by size: 1001 781 18 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 157 1293 1800 Size: 157 1136 507 Fragments arranged by size: 1136 507 157 HaeII r_GCGC'y Cuts at: 0 280 447 1770 1800 Size: 280 167 1323 30 Fragments arranged by size: 1323 280 167 30 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 26 1135 1167 1290 1322 1345 1377 1800 Size: 26 1109 32 123 32 23 32 423 Fragments arranged by size: 1109 423 123 32 32 32 26 23 HincII GTy'rAC Cuts at: 0 669 1212 1800 Size: 669 543 588 Fragments arranged by size: 669 588 543 HpaI GTT'AAC Cuts at: 0 1212 1800 Size: 1212 588 KpnI G_GTAC'C Cuts at: 0 1191 1800 Size: 1191 609 MslI CAynn'nnrTG Cuts at: 0 266 931 1800 Size: 266 665 869 Fragments arranged by size: 869 665 266 MspA1I CmG'CkG Cuts at: 0 7 417 756 906 1047 1581 1800 Size: 7 410 339 150 141 534 219 Fragments arranged by size: 534 410 339 219 150 141 7 NaeI GCC'GGC Cuts at: 0 257 334 1474 1800 Size: 257 77 1140 326 Fragments arranged by size: 1140 326 257 77 NgoMIV G'CCGG_C Cuts at: 0 255 332 1472 1800 Size: 255 77 1140 328 Fragments arranged by size: 1140 328 255 77 NheI G'CTAG_C Cuts at: 0 502 1800 Size: 502 1298 NspI r_CATG'y Cuts at: 0 604 1588 1800 Size: 604 984 212 Fragments arranged by size: 984 604 212 PasI CC'CwG_GG Cuts at: 0 475 1513 1800 Size: 475 1038 287 Fragments arranged by size: 1038 475 287 PflMI CCAn_nnn'nTGG Cuts at: 0 1050 1676 1800 Size: 1050 626 124 Fragments arranged by size: 1050 626 124 PfoI T'CCnGG_A Cuts at: 0 1363 1800 Size: 1363 437 PpuMI rG'GwC_Cy Cuts at: 0 799 1800 Size: 799 1001 PspXI vC'TCGA_Gb Cuts at: 0 985 1800 Size: 985 815 PstI C_TGCA'G Cuts at: 0 50 752 1800 Size: 50 702 1048 Fragments arranged by size: 1048 702 50 PvuII CAG'CTG Cuts at: 0 756 1581 1800 Size: 756 825 219 Fragments arranged by size: 825 756 219 SacI G_AGCT'C Cuts at: 0 206 1800 Size: 206 1594 SacII CC_GC'GG Cuts at: 0 907 1800 Size: 907 893 SanDI GG'GwC_CC Cuts at: 0 799 1800 Size: 799 1001 SapI GCTCTTCn'nnn_ Cuts at: 0 376 1800 Size: 376 1424 SfcI C'TryA_G Cuts at: 0 46 748 1800 Size: 46 702 1052 Fragments arranged by size: 1052 702 46 SmaI CCC'GGG Cuts at: 0 411 698 1105 1633 1800 Size: 411 287 407 528 167 Fragments arranged by size: 528 411 407 287 167 SmlI C'TyrA_G Cuts at: 0 142 985 1024 1196 1800 Size: 142 843 39 172 604 Fragments arranged by size: 843 604 172 142 39 SphI G_CATG'C Cuts at: 0 604 1800 Size: 604 1196 SrfI GCCC'GGGC Cuts at: 0 411 1800 Size: 411 1389 StyI C'CwwG_G Cuts at: 0 488 794 878 1130 1391 1800 Size: 488 306 84 252 261 409 Fragments arranged by size: 488 409 306 261 252 84 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 375 488 501 891 1800 Size: 375 113 13 390 909 Fragments arranged by size: 909 390 375 113 13 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 676 708 1800 Size: 676 32 1092 Fragments arranged by size: 1092 676 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 1371 1800 Size: 1371 429 XhoI C'TCGA_G Cuts at: 0 985 1196 1800 Size: 985 211 604 Fragments arranged by size: 985 604 211 XmaI C'CCGG_G Cuts at: 0 409 696 1103 1631 1800 Size: 409 287 407 528 169 Fragments arranged by size: 528 409 407 287 169 ZraI GAC'GTC Cuts at: 0 177 1800 Size: 177 1623 Enzymes that do cut: AarI AatII Acc65I AcuI AleI AlfI AlwNI ApaLI AvaI BanI BanII BbvCI BcgI BglI Bme1580I BmrI BmtI BpmI Bpu10I BpuEI BsaI BsaHI BsaWI BsaXI BseRI BseYI BsiEI BsiHKAI BsiWI BsmBI Bsp1286I BspEI BspMI BsrBI BsrDI BsrFI BssHII BstAPI BstBI BstEII BstXI BstYI Bsu36I BtgI BtsI CspCI DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I FalI HaeII Hin4I HincII HpaI KpnI MslI MspA1I NaeI NgoMIV NheI NspI PasI PflMI PfoI PpuMI PspXI PstI PvuII SacI SacII SanDI SapI SfcI SmaI SmlI SphI SrfI StyI TaqII TstI XcmI XhoI XmaI ZraI Enzymes that do not cut: AccI AclI AfeI AflII AflIII AgeI AhdI AloI ApaI ApoI AscI AseI AsiSI AvrII BaeI BamHI BbeI BbsI BciVI BclI BfrBI BglII BlpI BmgBI BplI BsaAI BsaBI BsgI BsmI BspHI BsrGI BssSI BstZ17I BtgZI ClaI DraI DraIII EcoRI EcoRV FseI FspI FspAI HindIII KasI MfeI MluI MmeI MscI NarI NcoI NdeI NotI NruI NsiI PacI PciI PmeI PmlI PpiI PshAI PsiI PspOMI PsrI PvuI RsrII SalI SbfI ScaI SexAI SfiI SfoI SgfI SgrAI SnaBI SpeI SspI StuI SwaI TatI Tth111I XbaI XmnI