(Linear) (Six-base) MAPSORT of: KIBB8442.seq Check: 1948 from: 1 to: 378
KIBB8442.orf
With 182 enzymes: SgfI *
March 3, 2008 11:06 ..
AcuI CTGAAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 175 378
Size: 175 203
AvaI C'yCGr_G
Cuts at: 0 92 378
Size: 92 286
BamHI G'GATC_C
Cuts at: 0 121 378
Size: 121 257
BbsI GAAGACnn'nnnn_
Cuts at: 0 40 378
Size: 40 338
BsaWI w'CCGG_w
Cuts at: 0 209 378
Size: 209 169
BseRI GAGGAGnnnnnnnn_nn'
Cuts at: 0 32 378
Size: 32 346
BseYI C'CCAG_C
Cuts at: 0 105 378
Size: 105 273
BsmI GAATG_Cn'
Cuts at: 0 72 378
Size: 72 306
BspMI ACCTGCnnnn'nnnn_
Cuts at: 0 77 378
Size: 77 301
BstYI r'GATC_y
Cuts at: 0 121 378
Size: 121 257
BtsI GCAGTG_nn'
Cuts at: 0 314 378
Size: 314 64
ClaI AT'CG_AT
Cuts at: 0 84 378
Size: 84 294
EaeI y'GGCC_r
Cuts at: 0 168 378
Size: 168 210
EarI CTCTTCn'nnn_
Cuts at: 0 251 364 378
Size: 251 113 14
Fragments arranged by size:
251 113 14
EciI GGCGGAnnnnnnnnn_nn'
Cuts at: 0 252 378
Size: 252 126
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 175 378
Size: 175 203
HaeII r_GCGC'y
Cuts at: 0 228 378
Size: 228 150
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'
Cuts at: 0 27 59 378
Size: 27 32 319
Fragments arranged by size:
319 32 27
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'
Cuts at: 0 89 230 378
Size: 89 141 148
Fragments arranged by size:
148 141 89
MscI TGG'CCA
Cuts at: 0 170 378
Size: 170 208
NspI r_CATG'y
Cuts at: 0 303 378
Size: 303 75
PflMI CCAn_nnn'nTGG
Cuts at: 0 249 333 378
Size: 249 84 45
Fragments arranged by size:
249 84 45
SmaI CCC'GGG
Cuts at: 0 94 378
Size: 94 284
XmaI C'CCGG_G
Cuts at: 0 92 378
Size: 92 286
XmnI GAAnn'nnTTC
Cuts at: 0 19 378
Size: 19 359
Enzymes that do cut:
AcuI AvaI BamHI BbsI BsaWI BseRI BseYI BsmI
BspMI BstYI BtsI ClaI EaeI EarI EciI Eco57MI
HaeII Hin4I MmeI MscI NspI PflMI SmaI XmaI
XmnI
Enzymes that do not cut:
AarI AatII AccI Acc65I AclI AfeI AflII AflIII
AgeI AhdI AleI AlfI AloI AlwNI ApaI ApaLI
ApoI AscI AseI AsiSI AvrII BaeI BanI BanII
BbeI BbvCI BcgI BciVI BclI BfrBI BglI BglII
BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I
BpuEI BsaI BsaAI BsaBI BsaHI BsaXI BsgI BsiEI
BsiHKAI BsiWI BsmBI Bsp1286I BspEI BspHI BsrBI BsrDI
BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI
BstZ17I Bsu36I BtgI BtgZI CspCI DraI DraIII DrdI
EagI EcoICRI EcoNI EcoO109I EcoRI EcoRV FalI FseI
FspI FspAI HincII HindIII HpaI KasI KpnI MfeI
MluI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV
NheI NotI NruI NsiI PacI PasI PciI PfoI
PmeI PmlI PpiI PpuMI PshAI PsiI PspOMI PspXI
PsrI PstI PvuI PvuII RsrII SacI SacII SalI
SanDI SapI SbfI ScaI SexAI SfcI SfiI SfoI
SgfI SgrAI SmlI SnaBI SpeI SphI SrfI SspI
StuI StyI SwaI TaqII TatI TstI Tth111I XbaI
XcmI XhoI ZraI