(Linear) (Six-base) MAPSORT of: KIBB8704.seq Check: 2910 from: 1 to: 714
KIBB8704.orf
With 182 enzymes: SgfI *
July 15, 2008 09:38 ..
AcuI CTGAAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 212 488 635 714
Size: 212 276 147 79
Fragments arranged by size:
276 212 147 79
AlwNI CAG_nnn'CTG
Cuts at: 0 280 714
Size: 280 434
ApoI r'AATT_y
Cuts at: 0 110 714
Size: 110 604
BanI G'GyrC_C
Cuts at: 0 250 714
Size: 250 464
BanII G_rGCy'C
Cuts at: 0 302 714
Size: 302 412
BbvCI CC'TCA_GC
Cuts at: 0 185 714
Size: 185 529
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'
Cuts at: 0 493 527 714
Size: 493 34 187
Fragments arranged by size:
493 187 34
BglI GCCn_nnn'nGGC
Cuts at: 0 376 714
Size: 376 338
BlpI GC'TnA_GC
Cuts at: 0 408 714
Size: 408 306
Bme1580I G_kGCm'C
Cuts at: 0 663 714
Size: 663 51
BmrI ACTGGGnnnn_n'
Cuts at: 0 605 714
Size: 605 109
BmtI G_CTAG'C
Cuts at: 0 122 714
Size: 122 592
Bpu10I CC'TnA_GC
Cuts at: 0 185 714
Size: 185 529
BseRI GAGGAGnnnnnnnn_nn'
Cuts at: 0 343 409 502 714
Size: 343 66 93 212
Fragments arranged by size:
343 212 93 66
BseYI C'CCAG_C
Cuts at: 0 273 477 578 714
Size: 273 204 101 136
Fragments arranged by size:
273 204 136 101
Bsp1286I G_dGCh'C
Cuts at: 0 302 663 714
Size: 302 361 51
Fragments arranged by size:
361 302 51
BsrFI r'CCGG_y
Cuts at: 0 403 714
Size: 403 311
BstAPI GCAn_nnn'nTGC
Cuts at: 0 556 714
Size: 556 158
Bsu36I CC'TnA_GG
Cuts at: 0 650 692 714
Size: 650 42 22
Fragments arranged by size:
650 42 22
BtgI C'CryG_G
Cuts at: 0 126 714
Size: 126 588
BtsI GCAGTG_nn'
Cuts at: 0 521 714
Size: 521 193
EarI CTCTTCn'nnn_
Cuts at: 0 611 677 714
Size: 611 66 37
Fragments arranged by size:
611 66 37
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 212 488 635 714
Size: 212 276 147 79
Fragments arranged by size:
276 212 147 79
HindIII A'AGCT_T
Cuts at: 0 434 714
Size: 434 280
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'
Cuts at: 0 610 714
Size: 610 104
MspA1I CmG'CkG
Cuts at: 0 412 714
Size: 412 302
NaeI GCC'GGC
Cuts at: 0 405 714
Size: 405 309
NgoMIV G'CCGG_C
Cuts at: 0 403 714
Size: 403 311
NheI G'CTAG_C
Cuts at: 0 118 714
Size: 118 596
NspI r_CATG'y
Cuts at: 0 712 714
Size: 712 2
PflMI CCAn_nnn'nTGG
Cuts at: 0 280 714
Size: 280 434
PvuII CAG'CTG
Cuts at: 0 412 714
Size: 412 302
SfcI C'TryA_G
Cuts at: 0 632 714
Size: 632 82
StyI C'CwwG_G
Cuts at: 0 461 482 566 714
Size: 461 21 84 148
Fragments arranged by size:
461 148 84 21
Enzymes that do cut:
AcuI AlwNI ApoI BanI BanII BbvCI BcgI BglI
BlpI Bme1580I BmrI BmtI Bpu10I BseRI BseYI Bsp1286I
BsrFI BstAPI Bsu36I BtgI BtsI EarI Eco57MI HindIII
MmeI MspA1I NaeI NgoMIV NheI NspI PflMI PvuII
SfcI StyI
Enzymes that do not cut:
AarI AatII AccI Acc65I AclI AfeI AflII AflIII
AgeI AhdI AleI AlfI AloI ApaI ApaLI AscI
AseI AsiSI AvaI AvrII BaeI BamHI BbeI BbsI
BciVI BclI BfrBI BglII BmgBI BplI BpmI BpuEI
BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BsgI BsiEI
BsiHKAI BsiWI BsmI BsmBI BspEI BspHI BspMI BsrBI
BsrDI BsrGI BssHII BssSI BstBI BstEII BstXI BstYI
BstZ17I BtgZI ClaI CspCI DraI DraIII DrdI EaeI
EagI EciI EcoICRI EcoNI EcoO109I EcoRI EcoRV FalI
FseI FspI FspAI HaeII Hin4I HincII HpaI KasI
KpnI MfeI MluI MscI MslI NarI NcoI NdeI
NotI NruI NsiI PacI PasI PciI PfoI PmeI
PmlI PpiI PpuMI PshAI PsiI PspOMI PspXI PsrI
PstI PvuI RsrII SacI SacII SalI SanDI SapI
SbfI ScaI SexAI SfiI SfoI SgfI SgrAI SmaI
SmlI SnaBI SpeI SphI SrfI SspI StuI SwaI
TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI
XmnI ZraI