(Linear) (Six-base) MAPSORT of: KIBB9430.seq Check: 5413 from: 1 to: 1299 KIBB9430.orf With 182 enzymes: SgfI * July 18, 2007 13:38 .. AccI GT'mk_AC Cuts at: 0 887 1299 Size: 887 412 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1125 1299 Size: 1125 174 AfeI AGC'GCT Cuts at: 0 38 839 1299 Size: 38 801 460 Fragments arranged by size: 801 460 38 AflIII A'CryG_T Cuts at: 0 1007 1299 Size: 1007 292 AlwNI CAG_nnn'CTG Cuts at: 0 691 1299 Size: 691 608 AvaI C'yCGr_G Cuts at: 0 63 76 144 162 849 1050 1231 1251 Size: 63 13 68 18 687 201 181 20 Cuts at: 1251 1264 1299 Size: 13 35 Fragments arranged by size: 687 201 181 68 63 35 20 18 13 13 BanI G'GyrC_C Cuts at: 0 67 562 751 1299 Size: 67 495 189 548 Fragments arranged by size: 548 495 189 67 BanII G_rGCy'C Cuts at: 0 58 1057 1190 1299 Size: 58 999 133 109 Fragments arranged by size: 999 133 109 58 BbeI G_GCGC'C Cuts at: 0 71 566 755 1299 Size: 71 495 189 544 Fragments arranged by size: 544 495 189 71 BbsI GAAGACnn'nnnn_ Cuts at: 0 1088 1299 Size: 1088 211 BglI GCCn_nnn'nGGC Cuts at: 0 500 721 817 1299 Size: 500 221 96 482 Fragments arranged by size: 500 482 221 96 BglII A'GATC_T Cuts at: 0 263 1299 Size: 263 1036 Bme1580I G_kGCm'C Cuts at: 0 173 910 1299 Size: 173 737 389 Fragments arranged by size: 737 389 173 BmgBI CAC'GTC Cuts at: 0 911 1299 Size: 911 388 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1209 1266 1279 1299 Size: 1209 57 13 20 Fragments arranged by size: 1209 57 20 13 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 405 1299 Size: 405 894 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 334 1299 Size: 334 965 BsaHI Gr'CG_yC Cuts at: 0 68 563 752 1299 Size: 68 495 189 547 Fragments arranged by size: 547 495 189 68 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 403 409 433 439 455 485 997 1027 Size: 403 6 24 6 16 30 512 30 Cuts at: 1027 1299 Size: 272 Fragments arranged by size: 512 403 272 30 30 24 16 6 6 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 84 417 432 551 804 1005 1023 1026 Size: 84 333 15 119 253 201 18 3 Cuts at: 1026 1035 1038 1047 1299 Size: 9 3 9 252 Fragments arranged by size: 333 253 252 201 119 84 18 15 9 9 3 3 BseYI C'CCAG_C Cuts at: 0 81 276 793 1105 1299 Size: 81 195 517 312 194 Fragments arranged by size: 517 312 195 194 81 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 25 1209 1299 Size: 25 1184 90 Fragments arranged by size: 1184 90 25 BsiEI CG_ry'CG Cuts at: 0 434 933 1164 1299 Size: 434 499 231 135 Fragments arranged by size: 499 434 231 135 BsiHKAI G_wGCw'C Cuts at: 0 58 1299 Size: 58 1241 Bsp1286I G_dGCh'C Cuts at: 0 58 173 910 1057 1190 1299 Size: 58 115 737 147 133 109 Fragments arranged by size: 737 147 133 115 109 58 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1097 1299 Size: 1097 202 BsrBI CCG'CTC Cuts at: 0 219 339 935 1299 Size: 219 120 596 364 Fragments arranged by size: 596 364 219 120 BsrFI r'CCGG_y Cuts at: 0 46 70 383 576 928 1299 Size: 46 24 313 193 352 371 Fragments arranged by size: 371 352 313 193 46 24 BsrGI T'GTAC_A Cuts at: 0 776 1299 Size: 776 523 BssHII G'CGCG_C Cuts at: 0 969 995 1299 Size: 969 26 304 Fragments arranged by size: 969 304 26 BstAPI GCAn_nnn'nTGC Cuts at: 0 691 1299 Size: 691 608 BstBI TT'CG_AA Cuts at: 0 1079 1299 Size: 1079 220 BstXI CCAn_nnnn'nTGG Cuts at: 0 276 1299 Size: 276 1023 BstYI r'GATC_y Cuts at: 0 263 314 1299 Size: 263 51 985 Fragments arranged by size: 985 263 51 BtgI C'CryG_G Cuts at: 0 122 495 951 1299 Size: 122 373 456 348 Fragments arranged by size: 456 373 348 122 BtsI GCAGTG_nn' Cuts at: 0 486 1299 Size: 486 813 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 456 491 1299 Size: 456 35 808 Fragments arranged by size: 808 456 35 EaeI y'GGCC_r Cuts at: 0 44 431 492 930 1299 Size: 44 387 61 438 369 Fragments arranged by size: 438 387 369 61 44 EagI C'GGCC_G Cuts at: 0 431 930 1299 Size: 431 499 369 Fragments arranged by size: 499 431 369 EarI CTCTTCn'nnn_ Cuts at: 0 1044 1299 Size: 1044 255 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 349 798 880 1299 Size: 349 449 82 419 Fragments arranged by size: 449 419 349 82 EcoICRI GAG'CTC Cuts at: 0 56 1299 Size: 56 1243 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 405 1125 1299 Size: 405 720 174 Fragments arranged by size: 720 405 174 EcoO109I rG'GnC_Cy Cuts at: 0 1167 1299 Size: 1167 132 HaeII r_GCGC'y Cuts at: 0 40 71 566 755 800 841 1159 1299 Size: 40 31 495 189 45 41 318 140 Fragments arranged by size: 495 318 189 140 45 41 40 31 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 455 487 754 786 1111 1143 1299 Size: 455 32 267 32 325 32 156 Fragments arranged by size: 455 325 267 156 32 32 32 KasI G'GCGC_C Cuts at: 0 67 562 751 1299 Size: 67 495 189 548 Fragments arranged by size: 548 495 189 67 MluI A'CGCG_T Cuts at: 0 1007 1299 Size: 1007 292 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 1091 1299 Size: 1091 208 MspA1I CmG'CkG Cuts at: 0 688 953 1299 Size: 688 265 346 Fragments arranged by size: 688 346 265 NaeI GCC'GGC Cuts at: 0 48 72 930 1299 Size: 48 24 858 369 Fragments arranged by size: 858 369 48 24 NarI GG'CG_CC Cuts at: 0 68 563 752 1299 Size: 68 495 189 547 Fragments arranged by size: 547 495 189 68 NcoI C'CATG_G Cuts at: 0 495 1299 Size: 495 804 NgoMIV G'CCGG_C Cuts at: 0 46 70 928 1299 Size: 46 24 858 371 Fragments arranged by size: 858 371 46 24 NspI r_CATG'y Cuts at: 0 252 1128 1299 Size: 252 876 171 Fragments arranged by size: 876 252 171 PasI CC'CwG_GG Cuts at: 0 747 1131 1299 Size: 747 384 168 Fragments arranged by size: 747 384 168 PfoI T'CCnGG_A Cuts at: 0 1214 1299 Size: 1214 85 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1093 1125 1299 Size: 1093 32 174 Fragments arranged by size: 1093 174 32 PpuMI rG'GwC_Cy Cuts at: 0 1167 1299 Size: 1167 132 PspXI vC'TCGA_Gb Cuts at: 0 76 1264 1299 Size: 76 1188 35 Fragments arranged by size: 1188 76 35 SacI G_AGCT'C Cuts at: 0 58 1299 Size: 58 1241 SacII CC_GC'GG Cuts at: 0 954 1299 Size: 954 345 SexAI A'CCwGG_T Cuts at: 0 1283 1299 Size: 1283 16 SfoI GGC'GCC Cuts at: 0 69 564 753 1299 Size: 69 495 189 546 Fragments arranged by size: 546 495 189 69 SmaI CCC'GGG Cuts at: 0 851 1299 Size: 851 448 SmlI C'TyrA_G Cuts at: 0 76 349 1264 1299 Size: 76 273 915 35 Fragments arranged by size: 915 273 76 35 StyI C'CwwG_G Cuts at: 0 495 1299 Size: 495 804 TatI w'GTAC_w Cuts at: 0 776 1299 Size: 776 523 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 997 1029 1299 Size: 997 32 270 Fragments arranged by size: 997 270 32 Tth111I GACn'n_nGTC Cuts at: 0 469 1299 Size: 469 830 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 654 1299 Size: 654 645 XhoI C'TCGA_G Cuts at: 0 76 1264 1299 Size: 76 1188 35 Fragments arranged by size: 1188 76 35 XmaI C'CCGG_G Cuts at: 0 849 1299 Size: 849 450 XmnI GAAnn'nnTTC Cuts at: 0 193 1299 Size: 193 1106 Enzymes that do cut: AccI AcuI AfeI AflIII AlwNI AvaI BanI BanII BbeI BbsI BglI BglII Bme1580I BmgBI BplI BpmI BpuEI BsaHI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI Bsp1286I BspMI BsrBI BsrFI BsrGI BssHII BstAPI BstBI BstXI BstYI BtgI BtsI CspCI EaeI EagI EarI EciI EcoICRI Eco57MI EcoO109I HaeII Hin4I KasI MluI MmeI MspA1I NaeI NarI NcoI NgoMIV NspI PasI PfoI PpiI PpuMI PspXI SacI SacII SexAI SfoI SmaI SmlI StyI TatI TstI Tth111I XcmI XhoI XmaI XmnI Enzymes that do not cut: AarI AatII Acc65I AclI AflII AgeI AhdI AleI AlfI AloI ApaI ApaLI ApoI AscI AseI AsiSI AvrII BaeI BamHI BbvCI BcgI BciVI BclI BfrBI BlpI BmrI BmtI Bpu10I BsaI BsaAI BsaBI BsaWI BsiWI BsmI BsmBI BspEI BspHI BsrDI BssSI BstEII BstZ17I Bsu36I BtgZI ClaI DraI DraIII DrdI EcoNI EcoRI EcoRV FalI FseI FspI FspAI HincII HindIII HpaI KpnI MfeI MscI MslI NdeI NheI NotI NruI NsiI PacI PciI PflMI PmeI PmlI PshAI PsiI PspOMI PsrI PstI PvuI PvuII RsrII SalI SanDI SapI SbfI ScaI SfcI SfiI SgfI SgrAI SnaBI SpeI SphI SrfI SspI StuI SwaI TaqII XbaI ZraI